| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4161 |
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| Symbol | |
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| ID | 8117607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 4695814 |
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| End bp | 4697187 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644854537 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003006436 |
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| Protein GI | 251791715 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase
[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0332782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAC AGGCTATTGA CTGGGATTTA GCCCTGATCC AGAAATACAA CTATTCGGGG
CCTCGCTATA CGTCCTATCC TACCGCACTG GAATTCAGCG ACAGTTATGA TGACGCAGCG
TTTGCCCAGG CGGTGGCCCG TTATCCTCAC CGCCCGCTGT CGCTGTATTT GCATATCCCG
TTTTGCCACC GCCTGTGTTA TTTCTGCGGC TGTAATAAGC TGGTGACCCG GCAATTACAT
AAAGCGGATG AATACCTTGA TCGGCTGGCG TTGGAAATAC ATCAACGCGC ACCGTTGTTT
GCCAACCGCA CTGTTACGCA AATGCACTGG GGCGGCGGAA CGCCAACCTT CCTGAATAAA
GCGCAGATTA GCCGCCTGAT GGCGTTGCTT CGCCGGCATT TCCATTTTTC TGAACACGCG
GAAATGTCGC TGGAAGTGGA CCCGCGGGAA ATTGAATTGG ATGTGCTCGA TCATTTGCGC
GCCGAAGGGT TCAATCGCCT TAGCATGGGG GTGCAGGACT TCAATAAAGA GGTGCAGCGG
CTGGTTAATC GCGAGCAAGA TGAAGCCTTT ATTTTTGCGC TGATCGAGCG GGCCAAAGCG
CTGGGGTTCG CCTCCACCAA CATTGATTTG ATCTACGGTT TGCCAAAGCA GACGCCTGAC
AGCTTTGCCT TTACCTTGCA GCGGGTGGCG GAGCTGCGTC CGGATCGCCT GAGCGTATTC
AATTATGCTC ATTTACCCAA CCTGTTTGCT GCGCAGCGCA AGATTAAAGA TGCTGATCTG
CCGGATGCGG AACAAAAGCT GGCGATTTTG CAGCAAACCA TTCAAAGCCT GACCGCCGCG
GGTTACCAGT TCATTGGTAT GGATCATTTT GCCCGGCCGG ACGACGAACT GGCGGTGGCG
CAACGTGAAG GAAAACTGCA TCGCAATTTC CAGGGGTATA CCACCCAAGG CGACACCGAT
TTACTGGGGT TGGGGGTTTC CGCCATCAGT ATGATTGGCG ACAGTTATGC CCAGAATCAG
AAAGAATTGA AGCAGTACTA CGCTGACGTT GAACAGCGCG GTCACGCGTT ATGGCGCGGT
TTATCCCTGA CTCGTGATGA TTGCATCCGT CGTGATGTGG TCAAGGCGTT AATTTGCCAT
TTCCAACTGG AGTTTGCTGA GATTGAACAG GCATATGGCC TGTCGTTCGG TGACTATTTT
CGCGAGGATT TGGCGCTGCT GGCGCCAATG GCACAAGATG GGTTGGTTGA TATTCTGGCC
GAACGTATTC AGGTGACGCC GAAAGGGCGG CTGCTGATCC GCAATATTTG CATGTGCTTT
GACATCTATT TGCGCAGCAA AATGCGTGAG CGTCAGTTTT CCCGGGTGAT TTAA
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| Protein sequence | MSEQAIDWDL ALIQKYNYSG PRYTSYPTAL EFSDSYDDAA FAQAVARYPH RPLSLYLHIP
FCHRLCYFCG CNKLVTRQLH KADEYLDRLA LEIHQRAPLF ANRTVTQMHW GGGTPTFLNK
AQISRLMALL RRHFHFSEHA EMSLEVDPRE IELDVLDHLR AEGFNRLSMG VQDFNKEVQR
LVNREQDEAF IFALIERAKA LGFASTNIDL IYGLPKQTPD SFAFTLQRVA ELRPDRLSVF
NYAHLPNLFA AQRKIKDADL PDAEQKLAIL QQTIQSLTAA GYQFIGMDHF ARPDDELAVA
QREGKLHRNF QGYTTQGDTD LLGLGVSAIS MIGDSYAQNQ KELKQYYADV EQRGHALWRG
LSLTRDDCIR RDVVKALICH FQLEFAEIEQ AYGLSFGDYF REDLALLAPM AQDGLVDILA
ERIQVTPKGR LLIRNICMCF DIYLRSKMRE RQFSRVI
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