| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4147 |
|---|
| Symbol | |
|---|
| ID | 8117593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4678195 |
|---|
| End bp | 4680297 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644854523 |
|---|
| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
|---|
| Protein accession | YP_003006422 |
|---|
| Protein GI | 251791701 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATCTGT TCGAAAGCCT CAATCTGCTG ATTCAGCGTT ATCTGCCGGA AGACCAGATA
AAGCGCCTCA AGCAGGCTTA TCTTGTTGCA CGTGATGCTC ACGAGGGCCA GACTCGCTCC
AGCGGCGAGC CTTACATCAC CCATCCTGTG GCGGTGGCTT GCATTCTTGC TGAAATGCGT
CTCGACTACG AAACGCTGAT GGCCGCCTTG CTGCACGATG TGATTGAAGA TACGCCCGCC
ACCTACCAGG ATATGGAACA GTTGTTCGGC AAAAGCGTGG CTGAACTGGT GGAAGGCGTC
TCCAAGCTGG ATAAGCTGAA ATTCCGCGAT AAGAAAGAGG CTCAGGCGGA AAACTTCCGC
AAAATGATCA TGGCGATGGT GCAGGATATC CGCGTCATTC TGATCAAACT CGCTGACCGC
ACCCACAATA TGCGAACGCT AGGTTCGTTG CGCCCGGATA AACGCCGGCG CATCGCCCGG
GAAACGCTGG AAATCTACAG CCCGCTCGCA CACCGTCTCG GTATTCATCA TCTGAAAACC
GAACTGGAAG AGCTGGGTTT TGAAGCGCTC TACCCCAACC GCTATCGGGT CATCAAAGAG
GTGGTGAAAG CCGCCCGCGG CAACCGCAAG GAGATGATTC AAAAGATCCT CTCCGAAATT
GAAGGTCGCC TGAAAGAGGC GGGAATCAGT TGTCGCGTCA GCGGTCGCGA AAAGCATCTG
TACTCTATTT ACTGCAAGAT GCACCTGAAA GAGCAGCGCT TTCACTCGAT TATGGATATT
TATGCCTTTC GGGTGATCGT GCGGGAAGTG GATACCTGCT ACCGCGTGCT CGGGCAGGTA
CACAGCTTGT ACAAACCGCG CCCCGGCCGG GTGAAGGACT ATATCGCCAT CCCCAAGGCC
AACGGCTATC AGTCGCTCCA TACTTCTCTT ATCGGTCCGC ACGGTGTGCC GGTGGAAGTT
CAGATCCGTA CCGAGGATAT GGACCAGATG GCGGAAATGG GGGTCGCGGC GCATTGGGCC
TATAAAGAAG GCGAAAGCAG TAGTACGACG GCGCAGGTAC GTGCCCAACG CTGGATGCAA
AGCCTGCTGG AGCTACAGCA GAGCGCCGGT AGTTCGTTCG AATTCATCGA AAGCGTTAAA
TCCGACTTGT TTCCGGATGA AATTTACGTG TTCACGCCGG AAGGCCGCAT CGTCGAGCTG
CCCGCCGGCG CGACTCCGGT GGACTTTGCT TATGCGGTAC ATACCGATAT CGGCCACGCC
TGTGTCGGCG CCCGCGTCGA TCGCCAGCCG TATCCGCTGT CGCAAGCCCT TTCCAGCGGG
CAGACTATCG AAATTATCAC CGCGCCGGGC GCCCGTCCGA ACGCCGCCTG GCTCAACTTC
GTCGTCAGCT CCAAAGCACG TGCGAAAATT CGCCAAATGC TGAAAAACCT CAAGCGTGAC
GATTCCGTCA GTCTGGGGCG ACGCCTGATC AACCACGCAT TAGGTGGCGG CCGTAAATTG
TCTGATATTC CGGAGCAAAA TATTCAGCGG GAGCTGGAGC GTATGAAGCT CGCCTCGCTG
GACGATCTGT TGGCGGAAAT CGGTCTGGGT AACGCCATGA GCGTGGTGGT CGCACGCAAT
TTGCTGGAAG ATCATAATGA ATCCGGTACG GCAGGCATCC GCAAGTTGCC TATCAAGGGT
GCCGACGGCG TATTAATCAC GTTCGCCAAA TGTTGTCGCC CCATCCCCGG CGACCCAATC
ATCGCGCATG TCAGCCCCGG TAAAGGGCTG GTGATTCATC ATGAGTCCTG CCGCAACATC
CGTGGCTACC AGAAAGAACC GGAAAAATTC ATGGCGGTAG AGTGGGATGA AGTGACCGAG
CAGGAGTTCA TGACGGAAAT CAAGGTCGAC ATGTTCAACC ACCAGGGAGC ACTGGCTAAC
CTGACGGCGG CGATCAGCGC ATCAAACTCG AATATTCAGA GTATCAACAC CGAAGAACGG
GATGGCCGGG TGTACAGCGC CTTTATTCGC CTCACCACGC GCGACCGTAT CCATCTTGCG
AATATTATGC GCAAGATCCG CGTGATGCCG GACGTGATTA AAGTCAACCG TAACCGAAAT
TAG
|
|---|
| Protein sequence | MYLFESLNLL IQRYLPEDQI KRLKQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMR
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHLKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLKEAGIS CRVSGREKHL
YSIYCKMHLK EQRFHSIMDI YAFRVIVREV DTCYRVLGQV HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSL IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEGESSSTT AQVRAQRWMQ
SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA
CVGARVDRQP YPLSQALSSG QTIEIITAPG ARPNAAWLNF VVSSKARAKI RQMLKNLKRD
DSVSLGRRLI NHALGGGRKL SDIPEQNIQR ELERMKLASL DDLLAEIGLG NAMSVVVARN
LLEDHNESGT AGIRKLPIKG ADGVLITFAK CCRPIPGDPI IAHVSPGKGL VIHHESCRNI
RGYQKEPEKF MAVEWDEVTE QEFMTEIKVD MFNHQGALAN LTAAISASNS NIQSINTEER
DGRVYSAFIR LTTRDRIHLA NIMRKIRVMP DVIKVNRNRN
|
|---|
| |