| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4141 |
|---|
| Symbol | |
|---|
| ID | 8120993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4671103 |
|---|
| End bp | 4671897 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644854516 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003006416 |
|---|
| Protein GI | 251791695 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG ACAACAAACG TATTCTACTG ACCGGCGCCA GCAGCAACCT GGGCCAGGAA
CTGGCGCTGG CGCTGGCCGC CAAAGGCGCC AGGCTGTATT TGGTCGGCCG CAACGAACGG
GCATTGCTGG CGTTACAGCG CAGGCTGCCT GACGCCGGTC ATCACAATAT TTTGCTGGCT
GATCTCTGTA ACGAACAGGA TCGCAACGCG CTGGCGGAGT GTTTTCCGGA GAACGTCAGG
CTGGACGTGC TGATTAATAA TGCAGGCACA TCAACATTCA GCTTATTTAA CGAGCAAAGC
CACGACACCA TTCGCCAGCA GTTGATGCTC AATACCGAAG CGCCGATCCT ACTGACGCAC
GCGATGCTCG AGTGCCTCAA TACACCCGGC ATCATTATGA ACATTGGCTC CACGCTGGAT
AGCATCGGCT ACCCCGGGTA CAGCGTATAT TGCGCCAGTA AATTTGCCTT GCGTGGATTT
AGTGAAGCGT TGCACCGCGA ATTGTCATCT AAAAAAGTTA AAGTGTTGCA CCTGGCGCCA
AGGTTTGTGG ATACCCAGGA CAATCAGCCC GCCGTCAGCG GCCTGAATCA GGAATTGGGT
TACCACAGTG ACAGCCCCAT CCTGGTAGCC GAGCGTGTCG TGAGCGCACT GGAGCGTGAA
ACCGTGCGCC AGTGGCTGGG ATGGCCTGAA AAAGTGTTTG TTGCGCTAAA TGCATTGGTG
CCCACCGTGG TGGATAACGC CATCCGGCGC CAGTTAGCCG TTATCCAGCG TTATATAACA
TCGCAAAAAA AATAG
|
|---|
| Protein sequence | MKLDNKRILL TGASSNLGQE LALALAAKGA RLYLVGRNER ALLALQRRLP DAGHHNILLA
DLCNEQDRNA LAECFPENVR LDVLINNAGT STFSLFNEQS HDTIRQQLML NTEAPILLTH
AMLECLNTPG IIMNIGSTLD SIGYPGYSVY CASKFALRGF SEALHRELSS KKVKVLHLAP
RFVDTQDNQP AVSGLNQELG YHSDSPILVA ERVVSALERE TVRQWLGWPE KVFVALNALV
PTVVDNAIRR QLAVIQRYIT SQKK
|
|---|
| |