| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4135 |
|---|
| Symbol | |
|---|
| ID | 8120987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4664224 |
|---|
| End bp | 4665132 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644854510 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003006410 |
|---|
| Protein GI | 251791689 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCA ATAAAAAACC GACGCGGGTT AACCACGGCA GATTTTGGGG CATGAGGTTG
ATCAGGGTAG GGTTTATTGC TCCGTTGCTG ATCCCGTTAT GGCTATTTTG GGTAATCCCT
TTTTTTTGCA GCCTGTATAT CAGCTTCACC GACTGGGATT ATATTTCGCC GGATTATCAT
CTCGTCGGTA TGGATAATTA TCGTGATGTG TTGCACAGCG ATGATTTTGC CGGCGCGCTG
GGGCATACGT TGGTATTCGC CGTGGCGGTG GTCATCCCGG TCGTCGTGCT GGGGCTGGGT
TTTGCACTGC TGCTGCATCG CCAGTGCCGC GGGCAGCGCG GCTATCAGGC GATGATTTTT
TCTCCGTGGA TTACCCCGAC GGTGGCGGTA TCCGTGGTGT GGTCATGGGT GTTTGATTCC
CGCGCCGGGC TGGCGAATCA ACTACTCGGT CTGTTCGGTT ACGCCGGCGT GCCCTGGCTG
GAACAGCCGG GCAGCGCCAT GCTGGCAGTG GTGACGGTCA CGATATGGCA AGGCATCGGC
TGGACGATGA TGCTCTTTAT CACTGCGCTT AACCGCATTC CCGCCGACTT ATACGACGCC
GCACGGCTGG ACGGCGGCAG CCGCGCCAGG CGGCTGTTAA CCATCACACT GCCGCTGATT
TCTCCCACCA CTTTTTTCCT GTTGGTCGTC AATCTGGTGA ACGCCGTTCA GGCATTCGAT
CAATTTCAAA TGCTGACGCA GGGCGGCCCC GGCAACAGCA CCCGCACGCT GATGTACCTG
TTTTACCAGC AGGCGTTTCA GCAGTTCAGT ATGGGGCCGG CCGCCGCCAC CGCGGTAATG
ATCCTGCTGT TGGCGGGCTC GCTGTCGCTG GTCAACACGC TGGTTGCCCG CCGCTGGGTA
TACTTTTAA
|
|---|
| Protein sequence | MTVNKKPTRV NHGRFWGMRL IRVGFIAPLL IPLWLFWVIP FFCSLYISFT DWDYISPDYH
LVGMDNYRDV LHSDDFAGAL GHTLVFAVAV VIPVVVLGLG FALLLHRQCR GQRGYQAMIF
SPWITPTVAV SVVWSWVFDS RAGLANQLLG LFGYAGVPWL EQPGSAMLAV VTVTIWQGIG
WTMMLFITAL NRIPADLYDA ARLDGGSRAR RLLTITLPLI SPTTFFLLVV NLVNAVQAFD
QFQMLTQGGP GNSTRTLMYL FYQQAFQQFS MGPAAATAVM ILLLAGSLSL VNTLVARRWV
YF
|
|---|
| |