Gene Dd1591_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_4111 
Symbol 
ID8120963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp4639556 
End bp4640251 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID644854486 
Productregulatory protein GntR HTH 
Protein accessionYP_003006386 
Protein GI251791665 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTAC CCACACTGAA AGTTGAGCGG CTTTACCGGC AGATATCCAC GCTGCTGATT 
AACTGCATCA GGAACGGTCA GTTTGCGGCC GGGCAACTGC TGCCCTCGGA GCGAGAACTG 
GCGAAACAGC TGGGGGTAAG CCGCTCGTCC ATCCGTGAGG CGCTGATCGC GCTGGAAATC 
ACCGGTTGGG TGGAAATCCG TACCGGGAAC GGTGTGTACG TCAACGATCC GCTGCCGGAG 
GCGCCGCCCG CGGCAATACC GGAAGATGAA TTCAGCCTGC GGGCGTTTAT TCAGGCCCGG 
CAGGTGTATG AAGCGATGAT GGCGGAGCTG GCGGCGGTAC ATGCCACCGA CGAGCAGCGT 
GCTGCGCTAC AGGCGATCAC CCGCGATCTG TCCCGCCTTA ATGTCAATGA CGCGCAGTTT 
CTGCATGAAG ACAAGCGTTT CCACCTGTTG ATTAGCGAGA TGTCCGGCAA TGAAGTGTTG 
CAGGACATGA TGGAGTACCT GTGGAACAAG CGCCAGAGCA GCCGGTTCGT GCGGCTGGAA 
ACACTGTACG CCGATTCCGA TTTTCCCCGC ACCATGAATC AGGACCACGC CGACATCGCC 
GATGCCATCA TCGCGCGCGA CCCGGCACGG GCACGGACCA ACATGGCGCG TCACCTTCAG 
CATGTGTACG ATCATCTGTT CAGCGGCGAT GAGTAA
 
Protein sequence
MVLPTLKVER LYRQISTLLI NCIRNGQFAA GQLLPSEREL AKQLGVSRSS IREALIALEI 
TGWVEIRTGN GVYVNDPLPE APPAAIPEDE FSLRAFIQAR QVYEAMMAEL AAVHATDEQR 
AALQAITRDL SRLNVNDAQF LHEDKRFHLL ISEMSGNEVL QDMMEYLWNK RQSSRFVRLE 
TLYADSDFPR TMNQDHADIA DAIIARDPAR ARTNMARHLQ HVYDHLFSGD E