| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4093 |
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| Symbol | |
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| ID | 8120945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 4618386 |
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| End bp | 4618865 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644854469 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003006369 |
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| Protein GI | 251791648 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAATC TTATTTATCT TAGTGTTACC GGCGAGAAAC AGGGGCTTAT ATCCGCAGGG
TGTTCATCAC TGGATTCTAT TGGTAATAAG TATCAATCTA CCCATGAAAA TGAAATTTTC
ATTTATGAAC TAGTGAATAA TATTAATCGA GCTGATAATA TTTCTCTACT TCCCGTTGAG
ATTAGAAAGC CAATTGATAA AGCTACTCCA CTTTTTGCCC AGGCGATTAA TGACAATGAA
AAGTTGGAGT GCGTCTTTTC TTTCTACCGA ACATCTCAGT TTGGTGGGAA TGAACTTTAT
TTCAAAATGA AACTAAGAGA TGCGATCATT AATAATATTC GATTTTTTTA TCCTAATTCA
ATGACGCATA ACGACGTTCA GCCGCAGGAA AGTGTATCAT TCAAATTTGC TTCTATTGAA
TGGGAGCATA TTATTGCGCG CACTAGTGCT TACATGCTTT GGCAGAATGT AGCTTATTAA
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| Protein sequence | MSNLIYLSVT GEKQGLISAG CSSLDSIGNK YQSTHENEIF IYELVNNINR ADNISLLPVE
IRKPIDKATP LFAQAINDNE KLECVFSFYR TSQFGGNELY FKMKLRDAII NNIRFFYPNS
MTHNDVQPQE SVSFKFASIE WEHIIARTSA YMLWQNVAY
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