Gene Dd1591_4066 details

Gene Information

• Locus tag: Dd1591_4066
• Symbol: rsmD
• ID: 8120918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 4590365
• End bp: 4590988
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644854443
• Product: 16S rRNA m(2)G966-methyltransferase
• Protein accession: YP_003006343
• Protein GI: 251791622
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0742] N6-adenine-specific methylase
• TIGRFAM ID: [TIGR00095] RNA methyltransferase, RsmD family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAC ATCAAGCGAC ATCCGCGCCC GGTCAAATCC GCATTATCGG CGGTCAGTGG 
CGCGGCAGAA AACTCCCCGT GCCGGACAGC CCCGGCTTGC GCCCCACCAC CGACCGCGTC 
CGCGAAACCC TGTTCAACTG GCTCGCTCCG GTCATTCAGC AGTCGCGCTG TCTGGACTGT 
TTTGCCGGCA GCGGCGCGCT GGGGCTGGAG GCGCTGTCAC GCTCGGCCGC TCACGCCACG 
CTACTGGAAG CCGAACGCAA TGTGGCGCGC CAACTCGCGC AGAATCTGTC GCTGCTGCGT 
GCCGATAATG CCGAAGTGGT GAATACCGAT ACGCTGCAAT GGCTGGCTAA GCCGGTGTCC 
CCTCTCCCTT TCGACGTGGT GTTTCTCGAC CCGCCGTTTC GCCGCGGCCT GTTGGATGAC 
ACGCTGCGGT TGCTGGAAGA CGGCAATTGG CTGGCGGCGG AAGCCTGGAT TTATATCGAA 
ACCGAGGCGG AAAACCGCAT GTTGGCTATT CCGCCTACCT GGACGCTGCA CCGCGAGAAA 
ACCGCCGGTC AGGTGTCCTA CCGTCTTTAT ATCCGTCATG CGACTGATGC GACTCCCGGA 
GGCAACGATG AGCATTTGGA TTAA 

 

Protein sequence

MAKHQATSAP GQIRIIGGQW RGRKLPVPDS PGLRPTTDRV RETLFNWLAP VIQQSRCLDC 
FAGSGALGLE ALSRSAAHAT LLEAERNVAR QLAQNLSLLR ADNAEVVNTD TLQWLAKPVS 
PLPFDVVFLD PPFRRGLLDD TLRLLEDGNW LAAEAWIYIE TEAENRMLAI PPTWTLHREK 
TAGQVSYRLY IRHATDATPG GNDEHLD