| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4044 |
|---|
| Symbol | |
|---|
| ID | 8119643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4563890 |
|---|
| End bp | 4564777 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644854421 |
|---|
| Product | glycerol-3-phosphate transporter permease |
|---|
| Protein accession | YP_003006321 |
|---|
| Protein GI | 251791600 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTT CCCGTCCTGT TTTTGGCCGT AGCCTGCTGC CTTACCTGTT GGTGCTGCCG
CAACTGGCCA TCACGGCGAT CTTCTTTCTC TGGCCGGCCG GGCAGGCGCT CTGGTATTCG
GTGCAGAGCG TTGACCCGTT CGGCCTTTCC AGTCAGTTCG TCGGGCTGGA TAACTTCACC
AATCTATTCC AGGACAGCTA TTACCTTGGC TCGTTTTACA CCACGCTGTT GTTCAGTTTT
CTGGTGGCGG CCTCGGGGTT GTTGCTGTCG TTGTTTCTGG CCGCGCTGGT GGATTACACC
CTGCGCTTTA GCCGCCTGTA CCAGACGTTG CTGATTCTGC CTTACGCGGT GGCGCCCGCC
GTGGCGGCGG TGCTGTGGAT GTTTCTGTTC AACCCCGGCC TGGGGCTGAT TACCTGGCTA
TTGCACCAGT GGGATTACGA CTGGAACCAC GCGCAACACA GCGGTCAGGC GATGTTTCTG
GTGGTGCTGG CGTCAGTCTG GAAGCAAATC AGCTATAACT TCCTGTTTTT CCTCGCCGCG
TTGCAGTCTA TTCCCCGTTC GTTGATCGAA GCGGCGGCGA TTGACGGCGC CGGCCCGGTG
CGCCGTTTTT TCAATTTGGT GCTGCCGCTG ATTTCACCGG TGAGTTTTTT CCTGCTGGTG
GTCAATCTGA CTTACGCCTT CTTCGACACC TTCCCGGTGA TCGACGCCGC CACCGGCGGC
GGACCGGTTC AGGCCACCAC CACGCTTATT TATAAAATCT ACCGTGAAGG GTTCGCCGGT
CTTGACCTCT CCAGCTCGGC GGCGCAGTCG GTGGTGCTGA TGCTGGTGGT CACCGTACTG
ACGGTGATTC AGTTCCGTTT TGTCGAGCGT AAGGTGAACT ATCAATGA
|
|---|
| Protein sequence | MTASRPVFGR SLLPYLLVLP QLAITAIFFL WPAGQALWYS VQSVDPFGLS SQFVGLDNFT
NLFQDSYYLG SFYTTLLFSF LVAASGLLLS LFLAALVDYT LRFSRLYQTL LILPYAVAPA
VAAVLWMFLF NPGLGLITWL LHQWDYDWNH AQHSGQAMFL VVLASVWKQI SYNFLFFLAA
LQSIPRSLIE AAAIDGAGPV RRFFNLVLPL ISPVSFFLLV VNLTYAFFDT FPVIDAATGG
GPVQATTTLI YKIYREGFAG LDLSSSAAQS VVLMLVVTVL TVIQFRFVER KVNYQ
|
|---|
| |