| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4007 |
|---|
| Symbol | |
|---|
| ID | 8119606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4521607 |
|---|
| End bp | 4524306 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644854385 |
|---|
| Product | protein of unknown function DUF927 |
|---|
| Protein accession | YP_003006285 |
|---|
| Protein GI | 251791564 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAATA TCGATTTTAT CCGTGAAGTG ATCCGCTCGG CGGTGGGCCG CTGGCCTGAT
GTGCTGGCCC TGCTGGGTAT TGAGGTTCCC CGCCACCCCA CCACGCTCAC CCCCTGCCCG
GCGTGCGGCG GCAAAGACCG TTTCCAGTTC GATAATCTGG ACGGGCGCGG CACCTGGCAC
TGCCGCCACT GTGAGCCGGA AGCCGGTGAC GGGCTGGCGC TGGTGATGAA CGTTCGCCAG
TGTAACGCGG CAGACGCCGC CCGTCTGGTG GCCGACGTGC TGGGAATGCC AGCCGATGCG
CCGGCGCCGG ACACGCGCCG GCATGATACC CGGCAATCAC CGTCTGCCGA CGAGCAGGAC
CGTACCGCAG AAAAAGCCCG GCGCTTTGCC ACACGGCTGG AAAAGCTGAC CGCACAGGCA
CAGCCGGGGG AATCCGCTTA TCTGGCCGGA AAGGGCTTGA CCGGGTTGTC GTATCCGCTG
CTGCCCGATG GCACCCTGCT GCTGACGTTA CAGGACGCCA GCGGCACCAC CACTGCCGCA
CAGACGATAA GCCCCGATGG CCGCAAGCGA CAGGTGGCGG ACTCGGCGAA ACGCGGCGCG
TATCACGCGG TGAATGCGCC CGCGCAGCCC GATACGGTGA TTATCGCCGA AGGGCTGGCG
ACGGCATTAA GCGTTCACCG GATGCGCCCG GAGGCGCTGA CCCTCGCCGC TATCGACGCG
GGCAACATGG TGCCGGTGGC AAAGGCCATG CGCACCCGGT ATGCCGGCGC TCGTATCATT
CTGGCCGCCG ATAACGACAT CAAACCGGAT ACGCCGAACG CAGGGAAAGA CTGGGCGGAG
AAAGCCGCCC GCGAGGTCAA CGGCTGGGTG GCCCTGCCGC CGACCGATGA AAAGGCTGAC
TGGGACGATT ACCGCCAGCA ATACGGGCTG ATGGCCGCGA CACAGGCGTT TGCCGACTCA
CTGTATTCGC CGCCAGCGGA TGAACCGGAC GACGACAAGC CAACGCATAG CGACCCGTTA
AAGCCACATG TGCAAAGCCG CCGGGATGGC GTGTTCTGGA TAACCCCAAA AGTGGATAAA
GACAGCGGCG AGATTATCAA CAACGAAAGC TGGCTGTGCT CCCCGCTGGC GGTGGTGGGC
ATTGGCCGGG ACGACAAAGA CCAGTACCTG ATAATGCGCT GGCGGCCCAT CGGCGCGACG
GCTGACACCA CACAGGCCAT TCCGCTGGCA GATATCGGCG AGCGCGAGGG CTGGCGAACG
CTGAAAAACG GCGGTGTCAA CGTCACCACC AAAAACAGCC TGCGCGCCAT TCTGGCCGAC
TGGCTCCAGC GCAGTGCCGC ACGGGATATC TGGCATATCG CACACGCGAC CGGCTGGCAG
TGTGGGGCTT ACCTCATGCC GGACGGGGAA ATCATCGGAA CCCCTGACAG GCCGGTACTG
TTCAGCGGGC GCAGCGCGGC CGCCGCAGGC TACACCGTCA GCGGCACGGC AGAAGGCTGG
TGCGACACCG TGGCCCGCCT TGCCGGGGGC AATTACGCCA TGATGACCGG TATGGCGGCG
GCGCTGGCAG CACCGTTAAT CGGGCTGGTG GGCGCTGACG GGTTCGGCAT CCATTTCTAT
GAGCAATCGA GCGCCGGGAA AACCACCACC GCCAGTGTTG CCACCAGCCT GTACGGCAAC
CCGGAGTTAC TGCGCCTGAC GTGGTACGGC ACCGCGCTGG GGCTGGCGAA CGAAGCCGCC
GCCCACAACG ACGCGCTGAT GCCGCTGGAT GAAGTCGGTC AGGGCGCTGA CCCGGTGAGC
GTGGCGCAGG CCGCCTATGC ACTGTTTAAC GGCGTCGGCA AATTGCAGGG GGCCAAAGAA
GGCGGCAACC GGGAGTTAAA GCGCTGGCGC ACGGTAGCAA TCAGCACCGG CGAAATGGAC
TTGGAAACGT TCATTGCCGG CGTGGGCAGA AAAACCAGGG CGGGCCAACT GGTACGGCTG
CTGAACATCC CGTTAAGCAA AACGGCACGC TTTCATGAAC ACGCCAACGG CAAACAGCAC
GCCGACGCAC TGAAAGACGC CTGCCAGCAG TACCACGGTG CCGCAGGCCG GGCGTGGATT
AAGCACCTTG CCGACCACCC GCAACAGGCT ATCGAGGCCG TCAGGGCCGC AGAAGCCCGC
TGGCGCAGTC TCATTCCTGC CGACTATGGC GAACAGGTTC ACCGGGTGGC CGCCCGCTTT
GCCGTGATGG AGGCGGCGCT GTCGCTGGGC CGGGTCATTA CCGGCTGGGA TGAACAGACG
GGCCGGGATG CGATACAGCA CAGCTTTAAT GCCTGGGTGC GCGAATTCGG CACCGGCAAC
AAGGAGCACC AGCAGATTAT CGAGCAGTGC GAAGCGTTTC TGAACGCCCA CGGCCTGAGC
CGGTTTGCCC CGCTGCCCTA TAACCCGCAC GACCTGCCCA TACGCGACCT TGCCGGATAC
CGGGACAGGG GCAAGCACGA TGCCGCCCCG ATGATGTTCT ACACCTTCCC AGCCACTTTT
GAGGGCGAAA TCGCCAGAGG GTTTAACGTC AGGCAGTTTG CCGAAATCTT GCGCGGTGCG
GGCATGTTGA CGCCCCCCAC CAGTGGGCGC GGCTATCAAC GTAAGTCACC ACGGATTGAT
GGGCGGCAGA TAAACGTCTA TGTGCTTCAG TACCGGCCGG AAGATGACCC GCCAGAATAG
|
|---|
| Protein sequence | MRNIDFIREV IRSAVGRWPD VLALLGIEVP RHPTTLTPCP ACGGKDRFQF DNLDGRGTWH
CRHCEPEAGD GLALVMNVRQ CNAADAARLV ADVLGMPADA PAPDTRRHDT RQSPSADEQD
RTAEKARRFA TRLEKLTAQA QPGESAYLAG KGLTGLSYPL LPDGTLLLTL QDASGTTTAA
QTISPDGRKR QVADSAKRGA YHAVNAPAQP DTVIIAEGLA TALSVHRMRP EALTLAAIDA
GNMVPVAKAM RTRYAGARII LAADNDIKPD TPNAGKDWAE KAAREVNGWV ALPPTDEKAD
WDDYRQQYGL MAATQAFADS LYSPPADEPD DDKPTHSDPL KPHVQSRRDG VFWITPKVDK
DSGEIINNES WLCSPLAVVG IGRDDKDQYL IMRWRPIGAT ADTTQAIPLA DIGEREGWRT
LKNGGVNVTT KNSLRAILAD WLQRSAARDI WHIAHATGWQ CGAYLMPDGE IIGTPDRPVL
FSGRSAAAAG YTVSGTAEGW CDTVARLAGG NYAMMTGMAA ALAAPLIGLV GADGFGIHFY
EQSSAGKTTT ASVATSLYGN PELLRLTWYG TALGLANEAA AHNDALMPLD EVGQGADPVS
VAQAAYALFN GVGKLQGAKE GGNRELKRWR TVAISTGEMD LETFIAGVGR KTRAGQLVRL
LNIPLSKTAR FHEHANGKQH ADALKDACQQ YHGAAGRAWI KHLADHPQQA IEAVRAAEAR
WRSLIPADYG EQVHRVAARF AVMEAALSLG RVITGWDEQT GRDAIQHSFN AWVREFGTGN
KEHQQIIEQC EAFLNAHGLS RFAPLPYNPH DLPIRDLAGY RDRGKHDAAP MMFYTFPATF
EGEIARGFNV RQFAEILRGA GMLTPPTSGR GYQRKSPRID GRQINVYVLQ YRPEDDPPE
|
|---|
| |