Gene Dd1591_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3990 
Symbol 
ID8119589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4508260 
End bp4509090 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID644854369 
ProductABC transporter related 
Protein accessionYP_003006269 
Protein GI251791548 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTGG AAATTGAGAA TCTCCGTATC GCGTTTGCCA ACCGGACGGA AACGGTTGAG 
GCGGTACGCG GCGTTAGCTT CAGCGTCGGT AAGGAAAAAT TCGCTATTGT CGGTGAAAGC
GGTTCAGGCA AGTCGCTGAC CGCCCGTAGC CTGATGCAGT TGCTGCCGGG CAGCGCCCGC
GTTCAGGCCG ACAAACTGAG TTTTGACGGT ATCGACCTGC GCGGTGCCAG TGAAAAAACG
CTACGCCAGA TTCGCGGTAA GCGGGTCGGT TTTATCCTGC AAGACCCGAA ATATTCACTG
AACCCGGTGA TGACCATCGG CCAGCAGGTG GCGGAAGCCT GGCGCGAGCA CAAAGGCGGC
AGCCGCCGTG CAGCAATGGA GGCGGCCATC GACCTGTTGG ATCAGGTGCG CATTCGTGAC
CCGCAGCGGG TGGCAGGGCG TTATCCGCAT GAGGTGTCGG GTGGTATGGG GCAACGGGTG
ATGATCGCCA TGATGCTGGC ACCGGACCCG GAGTTGCTGA TTGCCGATGA ACCGACCTCG
GCGCTGGACG CCACCGTGCA GGCGGAGATC CTTTGCCTGA TCGACGATCT GGTCTCGCAG
CGCGGCATGG GGTTGATCCT GATCAGTCAC GATCTGCCGC TGGTGTCGCA TTTCTGCGAT
CGCGTAGCGG TGATGTACGC CGGGCGGATC GTCGAAATGC TACAGGCCAG CGAGCTGCTA
CAGGCGCAGC ATCCGTATAC GCAGGGGCTG CTGGCTTGCC TGCCGTCGCT CAAACACCCG
CGCGATCGGC TGCCGGTGCT GCAACGCGAC CCGGCGTGGA GGAGCGCATG A
 
Protein sequence
MLVEIENLRI AFANRTETVE AVRGVSFSVG KEKFAIVGES GSGKSLTARS LMQLLPGSAR 
VQADKLSFDG IDLRGASEKT LRQIRGKRVG FILQDPKYSL NPVMTIGQQV AEAWREHKGG
SRRAAMEAAI DLLDQVRIRD PQRVAGRYPH EVSGGMGQRV MIAMMLAPDP ELLIADEPTS
ALDATVQAEI LCLIDDLVSQ RGMGLILISH DLPLVSHFCD RVAVMYAGRI VEMLQASELL
QAQHPYTQGL LACLPSLKHP RDRLPVLQRD PAWRSA