| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3989 |
|---|
| Symbol | |
|---|
| ID | 8119588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4507507 |
|---|
| End bp | 4508247 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644854368 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003006268 |
|---|
| Protein GI | 251791547 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGG TAGAAAACCT GCGCATCGCC TTTGGCGGCG TCGAGGTGGT GAAAGGGGTG
TCCTTCGTGC TGGAGAGCGG CGACAGTTTC GGCATGGTGG GCGAAAGCGG TTCCGGCAAA
TCCACCATTT TACGTGCGCT GGCCGGGCTC AATACCCACT GGCAAGGGCG CATCGAGTTT
GGCGGCATGG CGCAATTGGC CCGACGGGAT CGCAGCTTTT TCCGCCAGGT GCAGATGGTG
TTTCAGGACC CGTACGGATC GCTGCACCCG CGCCAGACTA TCGATCGTAT TTTGCATGAG
CCGCTGCTGG TGCACCGCTT CGATCGTGCC GAACAGCGTA TCACCCGGGC GCTGGATGAA
GTCGGCCTGC CTGCCGCGGC GCGTTTTCGT TTTCCCCATC AGCTTTCCGG CGGCCAGCGC
CAGCGGGTGG CGATTGCCCG TGCGCTGATC GCCGAGCCGG AAGTGCTATT GCTGGATGAA
CCGACCTCGG CGCTGGATGT CTCGGTGCAG GCGGAAATCC TCAACCTGCT GACAGACCTG
CGTCAGGCGC GTAGGCTGAC CTATATCATG GTCAGCCACA ATCTGGCGGT GGTGTCGCAT
CTGTGCCGGC GCGTCGGTGT GATGCAGCAG GGTGAAATGG TGGAACAGCT CAGTGTGGAA
GACTTGCGGG CGCGTAACCT GCATCACCCC CACACCGCGG AACTGTACGA TTTAAGTATG
ACGCTGGAGG AACCGGCATG A
|
|---|
| Protein sequence | MIKVENLRIA FGGVEVVKGV SFVLESGDSF GMVGESGSGK STILRALAGL NTHWQGRIEF
GGMAQLARRD RSFFRQVQMV FQDPYGSLHP RQTIDRILHE PLLVHRFDRA EQRITRALDE
VGLPAAARFR FPHQLSGGQR QRVAIARALI AEPEVLLLDE PTSALDVSVQ AEILNLLTDL
RQARRLTYIM VSHNLAVVSH LCRRVGVMQQ GEMVEQLSVE DLRARNLHHP HTAELYDLSM
TLEEPA
|
|---|
| |