Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3977 |
Symbol | |
ID | 8117582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4496129 |
End bp | 4496608 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644854356 |
Product | type VI secretion system effector, Hcp1 family |
Protein accession | YP_003006256 |
Protein GI | 251791535 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATT TAATCTATTT AACCATCGAA GGGAAAAACC AAGGTTTAAT TTCTTCCGGA TGTTCTAAAT TTGAATCCAT AGGTAATAAA TACCAGAAAT CACATGGCGA TGAAATATTT GTACTATCAT TTGAGCACGA CATGACAAGA GCGATGAATA TCAATCATAT GCCTATTTCG TTCACAAAGC TCATTGATAA ATCATCTCCA TTACTTGGTG TAGCGATAAC AGAAAATGAG GAACTCTCGT TGCACTTTAA ATTTTATAGA ACATCAGAAA CCGGCGGAGT TGAACTTTAC TATTCAATAA AAGCAAATAA AGCCTTTATT GTTAAACTTA GTGTTATCTA TCCCCACGCC ATAAATCATG CTGATAACCA ACCTGAAGAA CTCATAAGTA TAAAATACTC TGACATTCAG TGGAACCACC ACATTGCCAG AACATCAGGA TACAGTATAT GGGGAGAGAA TAGTTTCTAA
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Protein sequence | MANLIYLTIE GKNQGLISSG CSKFESIGNK YQKSHGDEIF VLSFEHDMTR AMNINHMPIS FTKLIDKSSP LLGVAITENE ELSLHFKFYR TSETGGVELY YSIKANKAFI VKLSVIYPHA INHADNQPEE LISIKYSDIQ WNHHIARTSG YSIWGENSF
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