Gene Dd1591_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3969 
Symbol 
ID8117574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4486485 
End bp4487450 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID644854348 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003006248 
Protein GI251791527 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGA TGCAAATTGA AACCGTGGAA CTGCCGCTGG CCCGTCCGTT CGCCATTTCC 
CGCGGCACGC GTACCGCCGT CACCGTGGTG CGGGTAACGC TGGAAGAGCG CGGCTTTATC
GGCCGGGGGG AATGCACCCC GACTGCGCAC TATCAGGAAA CCGCCGACAG CGTGACCCGT
CAGTTGGAAA CCGTGCGTCG GGTGGTGGAG AACGGCGTCG GTCTGGACGC GTTGCAGCGG
TTGCTGCCGC CCGGTTCGGC CCGCAACGCG CTGGACTGCG CCCTGTGGCG GCTGAACGCC
GCGCTCGCCC GACAAACGCT GTGGCAGCAC CTCGCCATCG TGCCGCCGCA GTCGATCGTC
ACCGCTGAAA CCCTGAGCCT CGACAGCGTG GAAAACATGG CGAACGCCGC CAAAGACGCG
GTTTCCCGCG GTGCGCTGCT GCTGAAAATC AAGCTCGACC GAAACCAGAT TCTGGAAAAA
GTGGCGGCGA TTCGTCAGTC CGCGCCCAAC GTGACGCTGA TTGTCGATGC CAACGAAGCC
TGGAGCGGGC TGGAGCTGGA ACCGCTACTG CGCCAATTGG CCGCGCATCG CATCGCGATG
GTGGAACAGC CGCTGCCCGC CGGGCAGGAC GGCGAACTGG CGACGTTTGA ACACGCCATT
GCGGTGTGCG CCGACGAAAG CTGTCATCAC CGTGGCGACA TCGCCGCCCT GCGTGACCGT
TACGAGATGA TCAACATCAA GCTGGACAAG TGCGGCGGGC TGACCGAAGC GCTGGCGATG
GTGGCACAAG CACGCCAGTA CGGCCTGCGC ATCATGGTGG GCTGTATGCT GGGTTCCTCG
CTGGCGATGG AAGCGGCCAT GCCGGCGGCG CTGGCGGCCG AACATGTGGA TCTGGACGGC
CCGATCTGGC TGGCCGCCGA CAGCTCGCCG TACCTGACGT ATAACCTTGG CCGCATCTGG
CTGTGA
 
Protein sequence
MRQMQIETVE LPLARPFAIS RGTRTAVTVV RVTLEERGFI GRGECTPTAH YQETADSVTR 
QLETVRRVVE NGVGLDALQR LLPPGSARNA LDCALWRLNA ALARQTLWQH LAIVPPQSIV
TAETLSLDSV ENMANAAKDA VSRGALLLKI KLDRNQILEK VAAIRQSAPN VTLIVDANEA
WSGLELEPLL RQLAAHRIAM VEQPLPAGQD GELATFEHAI AVCADESCHH RGDIAALRDR
YEMINIKLDK CGGLTEALAM VAQARQYGLR IMVGCMLGSS LAMEAAMPAA LAAEHVDLDG
PIWLAADSSP YLTYNLGRIW L