Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3963 |
Symbol | slmA |
ID | 8117568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4482220 |
End bp | 4482816 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644854342 |
Product | nucleoid occlusion protein |
Protein accession | YP_003006242 |
Protein GI | 251791521 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000172432 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGA AAGAAAATAC GAAAAGGAAC CGCCGCGAGG AAATTCTGCA GGCACTGGCG CAAATGCTGG AATCCAGCGA CGGCAGTCAA CGTATCACCA CCGCCAAACT GGCCGCCACC GTCGGTGTTT CAGAAGCCGC GCTTTACCGG CATTTTCCCA GCAAAACGCG GATGTTTGAC AGCCTGATCG AATTTATTGA AGACAGCCTG ACCACCCGCA TCAACCTGAT CCTGCAGGAT GAAAAAGACA CCTTTAATCG GCTACGGCTG ATTTTATTGC TGATTCTCGG CTTTGCGGAG AAAAACCCCG GTTTGACGCG TATTCTCACC GGTCATGCGC TGATGTTCGA ACAAGACCGA CTGCAAGGGC GCATCAACCA GTTGTTTGAC CGCATTGAAT CTCAGTTGCG CCAGGTACTG CGCGAACATA AGCTGCGCAG CGGCGAAGGG TTCCGCCATG ATGAAACGCT GCTGGCCAGC CAGTTGCTGG CATTCTGCGA AGGTCTGCTC TCGCGCTTTA CCCGCTCCGA GTTCCGCTCC CTGCCGACGC AGGATTTCGA GACGCGTTGG CCGCTGCTGG CGGCCCAGCT TCAGTAA
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Protein sequence | MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAT VGVSEAALYR HFPSKTRMFD SLIEFIEDSL TTRINLILQD EKDTFNRLRL ILLLILGFAE KNPGLTRILT GHALMFEQDR LQGRINQLFD RIESQLRQVL REHKLRSGEG FRHDETLLAS QLLAFCEGLL SRFTRSEFRS LPTQDFETRW PLLAAQLQ
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