Gene Dd1591_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3949 
Symbol 
ID8117554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4469022 
End bp4470107 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID644854328 
Productlipopolysaccharide heptosyltransferase III 
Protein accessionYP_003006228 
Protein GI251791507 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II
[TIGR02201] lipopolysaccharide heptosyltransferase III, putative 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCAC CGCGCAAGGT TGAACTCCGG CGAATTCTGA TAACCAAGTT CCGCCATCAT 
GGCGACGTAT TGTTGACGTC GCCGCTGTTT TCCATTCTGC GCCAGCGTTA CCCGGACGCC
CAAATCGACG CACTGGTGTT TGCCGATACG GCGGAAATGC TGTCGTTGCA CCCCGCGATT
GACCATCTTT ATACCGTCGA CAAGAAATGG AAAAAACTCG GGGTGTTCGG TCATCTGGCA
AAAGAGTGGG CATTGCTGAA GACGCTGCGG GCACAACGCT ATGACGCCAT CATTCATCTC
ACCGAGAGTA TGCGCGGTTT ATGGATCGCG CGTCTTGCGG GTATCCCGCT CGGCGTGACC
TTTCGCAACA GCGCACGCGA TAAACTGTCA TTCTGGAAAA AAACCTTTCA GTATCGCGTA
CCGCGTATCC CACGCCGCCA TACCGTAGAA TCCCATCTGG ATACCCTGCG GGCGTTAGGG
ATCCAGCCGG AGCTGGAAGA ACGCCGGTTG CAACTGGTCG CCGGTGATGA CGCCGATCAG
GCGGTAGACC AGAAACTGCG GGCCCAGCAA TGGCAAGGGC AACCCTTTAT CGTGGTACAT
CCAACATCAC GCTGGCTGTT CAAATGTTGG AAAAGCAGCG CCATGGCTCA AGCCATCAAT
ACCTTGAGCG AACGCGGTTA CACCATCGTA CTGAGCGCCT CACCGGCGGA AAGCGAGATG
GCGATGATTG CCGATATCAA ATCGCAACTG ACCCACCCCG TGCTGGATCT GGCCGGCCAG
TTGACGCTGA AACAACTGTC GAGCCTGATC GGTAAAGCAC AACTGTTGCT GGGGGTAGAT
TCGGTGCCGA TGCACATCGC CTCTGCGATG CAAACGCCCG TAGTAGCGTT ATTCGGCCCT
AGCGGAGAGA CCGAATGGTC GCCGTGGATG ACCGTCAACC GGGTTATCGT CTCTGACCGT
CACCCCTGCC GGCCCTGCGG TAAAGACGGT TGCGGCGGCA GTAAAATCAG CGACTGCCTG
CAGCAAATCA GCGTCCAGCA GGTCTTACTG GCCGTCGACT CCGCACTGCT GGAGGCGCAG
GGATGA
 
Protein sequence
MTSPRKVELR RILITKFRHH GDVLLTSPLF SILRQRYPDA QIDALVFADT AEMLSLHPAI 
DHLYTVDKKW KKLGVFGHLA KEWALLKTLR AQRYDAIIHL TESMRGLWIA RLAGIPLGVT
FRNSARDKLS FWKKTFQYRV PRIPRRHTVE SHLDTLRALG IQPELEERRL QLVAGDDADQ
AVDQKLRAQQ WQGQPFIVVH PTSRWLFKCW KSSAMAQAIN TLSERGYTIV LSASPAESEM
AMIADIKSQL THPVLDLAGQ LTLKQLSSLI GKAQLLLGVD SVPMHIASAM QTPVVALFGP
SGETEWSPWM TVNRVIVSDR HPCRPCGKDG CGGSKISDCL QQISVQQVLL AVDSALLEAQ
G