Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3902 |
Symbol | fadA |
ID | 8117507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4415833 |
End bp | 4416996 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644854281 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_003006181 |
Protein GI | 251791460 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0917762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACG CAGTAATTGT TGATGCGGTG CGTACCCCGA TGGGGCGTTC CAAAGGCGGT GCGTTTCGTC AGGTTCGGGC GGAAACCCTG TCCGCTCACC TGATGCGCAG CCTGCTGAGT CGCAACCCGG CACTGGAAGC GGACAAGATT AACGACATCT ACTGGGGTTG CGTGCAACAG ACGTTGGAGC AAGGCTTCAA CGTGGCGCGC AACGCGGCGT TGCTGGCGGA AATCCCCCAT TCGGTGCCGG CGGTGACGGT CAACCGCCTG TGCGGTTCAT CCATGCAAGC GTTACACGAC GCGGCACGCG CCATTATGGT GGGTGATGCC GACGTTTGTC TGGTCGGCGG CGTCGAACAC ATGGGACATG TGCCGATGAC CCACGGTGTC GATTTTCACC CAGGACTCGG CAAGAGCATT GCCAAAGCGG CAGCAATGAT GGGGTTGACG GCGGAACTGC TGGCGCGCCA ACACCACATC AGCCGCGAAA TGCAGGACGC ATTTGCCGTC CGCTCACACC AGCGAGCCTG GGCGGCGACC CAGTCCGGCG CCTTTCGCCG CGAAATTATC CCCACTACCG GCCATAACGC CGACGGCGCG CTGCAACCGT TTGACTACGA CGAAGTGGTC AGAGCGGAAA CCAGTATCGA CGCGCTGGCA GCGCTGCGCC CGGCATTTGA CCCAGTCAAT GGCACGGTCA CCGCCGGCAG TTCATCAGCG CTGTCGGATG GCGCGGCAGC GCTGCTGGTA ATGAGCGAAT CCCGCGCGCT GGAGTTAGGG TTGACGCCCC GGGTACGCCT TCGTGCGACG GCGGTCGTCG GGTGCGATCC CTCCGTGATG GGATACGGCC CGGTGCCCGC CACCCAGAAA GCGTTACAAC GAGCAGGGCT CTCACTGAGT GATATCGGTC TGTTTGAACT GAATGAGGCG TTTGCCGCCC AAACGCTGCC CTGTCTCAAA GCACTCGGGC TACTGGAAAG CATGGACGAC AAGATTAACC TGAACGGCGG CGCCATTGCG CTTGGTCACC CGCTGGGATG CTCCGGCGCA CGCATCATCA CCACACTCAT CAATTTGATG GAACAGCGGA ATGTGGAATT CGGCGTGGCG ACCATGTGTA TCGGTTTAGG TCAAGGCATC GCGACGGTAC TGGAACGGGT ATAA
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Protein sequence | MENAVIVDAV RTPMGRSKGG AFRQVRAETL SAHLMRSLLS RNPALEADKI NDIYWGCVQQ TLEQGFNVAR NAALLAEIPH SVPAVTVNRL CGSSMQALHD AARAIMVGDA DVCLVGGVEH MGHVPMTHGV DFHPGLGKSI AKAAAMMGLT AELLARQHHI SREMQDAFAV RSHQRAWAAT QSGAFRREII PTTGHNADGA LQPFDYDEVV RAETSIDALA ALRPAFDPVN GTVTAGSSSA LSDGAAALLV MSESRALELG LTPRVRLRAT AVVGCDPSVM GYGPVPATQK ALQRAGLSLS DIGLFELNEA FAAQTLPCLK ALGLLESMDD KINLNGGAIA LGHPLGCSGA RIITTLINLM EQRNVEFGVA TMCIGLGQGI ATVLERV
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