Gene Dd1591_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3902 
SymbolfadA 
ID8117507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4415833 
End bp4416996 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content61% 
IMG OID644854281 
Product3-ketoacyl-CoA thiolase 
Protein accessionYP_003006181 
Protein GI251791460 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0917762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG CAGTAATTGT TGATGCGGTG CGTACCCCGA TGGGGCGTTC CAAAGGCGGT 
GCGTTTCGTC AGGTTCGGGC GGAAACCCTG TCCGCTCACC TGATGCGCAG CCTGCTGAGT
CGCAACCCGG CACTGGAAGC GGACAAGATT AACGACATCT ACTGGGGTTG CGTGCAACAG
ACGTTGGAGC AAGGCTTCAA CGTGGCGCGC AACGCGGCGT TGCTGGCGGA AATCCCCCAT
TCGGTGCCGG CGGTGACGGT CAACCGCCTG TGCGGTTCAT CCATGCAAGC GTTACACGAC
GCGGCACGCG CCATTATGGT GGGTGATGCC GACGTTTGTC TGGTCGGCGG CGTCGAACAC
ATGGGACATG TGCCGATGAC CCACGGTGTC GATTTTCACC CAGGACTCGG CAAGAGCATT
GCCAAAGCGG CAGCAATGAT GGGGTTGACG GCGGAACTGC TGGCGCGCCA ACACCACATC
AGCCGCGAAA TGCAGGACGC ATTTGCCGTC CGCTCACACC AGCGAGCCTG GGCGGCGACC
CAGTCCGGCG CCTTTCGCCG CGAAATTATC CCCACTACCG GCCATAACGC CGACGGCGCG
CTGCAACCGT TTGACTACGA CGAAGTGGTC AGAGCGGAAA CCAGTATCGA CGCGCTGGCA
GCGCTGCGCC CGGCATTTGA CCCAGTCAAT GGCACGGTCA CCGCCGGCAG TTCATCAGCG
CTGTCGGATG GCGCGGCAGC GCTGCTGGTA ATGAGCGAAT CCCGCGCGCT GGAGTTAGGG
TTGACGCCCC GGGTACGCCT TCGTGCGACG GCGGTCGTCG GGTGCGATCC CTCCGTGATG
GGATACGGCC CGGTGCCCGC CACCCAGAAA GCGTTACAAC GAGCAGGGCT CTCACTGAGT
GATATCGGTC TGTTTGAACT GAATGAGGCG TTTGCCGCCC AAACGCTGCC CTGTCTCAAA
GCACTCGGGC TACTGGAAAG CATGGACGAC AAGATTAACC TGAACGGCGG CGCCATTGCG
CTTGGTCACC CGCTGGGATG CTCCGGCGCA CGCATCATCA CCACACTCAT CAATTTGATG
GAACAGCGGA ATGTGGAATT CGGCGTGGCG ACCATGTGTA TCGGTTTAGG TCAAGGCATC
GCGACGGTAC TGGAACGGGT ATAA
 
Protein sequence
MENAVIVDAV RTPMGRSKGG AFRQVRAETL SAHLMRSLLS RNPALEADKI NDIYWGCVQQ 
TLEQGFNVAR NAALLAEIPH SVPAVTVNRL CGSSMQALHD AARAIMVGDA DVCLVGGVEH
MGHVPMTHGV DFHPGLGKSI AKAAAMMGLT AELLARQHHI SREMQDAFAV RSHQRAWAAT
QSGAFRREII PTTGHNADGA LQPFDYDEVV RAETSIDALA ALRPAFDPVN GTVTAGSSSA
LSDGAAALLV MSESRALELG LTPRVRLRAT AVVGCDPSVM GYGPVPATQK ALQRAGLSLS
DIGLFELNEA FAAQTLPCLK ALGLLESMDD KINLNGGAIA LGHPLGCSGA RIITTLINLM
EQRNVEFGVA TMCIGLGQGI ATVLERV