Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3895 |
Symbol | |
ID | 8118856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4401797 |
End bp | 4402756 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644854270 |
Product | biotin--protein ligase |
Protein accession | YP_003006174 |
Protein GI | 251791453 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.282712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT ATACCGTCCC GCTGAAACTA ATCTCTATTC TCTCGAGTGG TGAATTCTAT TCGGGCGAGT ATCTTGGCGA ACTGATGGGG ATGAGCCGTG CTGCCATCAA TAAACATGTT CAGACCATTA AAGAGTGGGG ATTGGATGTA TATACGGTAA CAGGGAAAGG CTATGCGCTT TCTTCGCCTA TTCAATTGCT CGATGCAGAT AAAATCCGCT CGGAAATACC AGATGGCAAT ATAGCTGTTT TGCCTGTTAT TGATTCTACT AATCAATATC TGTTGGACCG TCTCGACTCG ATATCGTCAG GTGATGCCTG TATCGCCGAG TATCAGCAGG CAGGTCGAGG CCGTCGTGGG CGACAATGGT TTTCTCCCTT TGGTAGTAAT CTGTATTTAT CACTGTACTG GCGTCTGGAG CAAGGCCCTG CCGCAGCGGT TGGTGTTAGC TTGGTGATTG GCATCATCAT GGCTGAGGTT TTACACCAAC TGGGGGCCGA AGGCGTTCGT GTTAAATGGC CGAATGACCT GTATCTGAAT GATAAAAAAC TGGCAGGTAT TCTTGTTGAA CTAAATGGTC GTACGGGAGA TGCTGCACAT CTGGTTATTG GTGCGGGCAT TAACTTACGT ATGAACTCTT CAGGCTCAAA TGTGATCAAT CAAGATTGGA TCAATTTACA AGATGCAGGG ATAGATATTG ATCGCAATAT GCTGGCTGTG AAACTCATTA CCGAGTTACG CACAGCATTA ACTGTTTATG AGCAGCAAGG TTTAACACCG TTCATTTCTC GCTGGAGCAC GTTGGATAAT TTTTATAATC GGGAAGTAAA ATTAATTGTT GGTAATAGAG AAATTATCGG CGTTGATAAA GGGATTGACC GTCAGGGTGC ATTGTTGCTG GAAAAGGATG GTGAAGCTCA ACCTTATATC GGTGGCGAAA TTTCCTTGCG TGGATGGTAA
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Protein sequence | MKDYTVPLKL ISILSSGEFY SGEYLGELMG MSRAAINKHV QTIKEWGLDV YTVTGKGYAL SSPIQLLDAD KIRSEIPDGN IAVLPVIDST NQYLLDRLDS ISSGDACIAE YQQAGRGRRG RQWFSPFGSN LYLSLYWRLE QGPAAAVGVS LVIGIIMAEV LHQLGAEGVR VKWPNDLYLN DKKLAGILVE LNGRTGDAAH LVIGAGINLR MNSSGSNVIN QDWINLQDAG IDIDRNMLAV KLITELRTAL TVYEQQGLTP FISRWSTLDN FYNREVKLIV GNREIIGVDK GIDRQGALLL EKDGEAQPYI GGEISLRGW
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