| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3861 |
|---|
| Symbol | purH |
|---|
| ID | 8118818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4366117 |
|---|
| End bp | 4367706 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644854232 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_003006140 |
|---|
| Protein GI | 251791419 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000584641 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC GTCGTCCTAT CCGTCGTGCT TTGCTCAGCG TATCTGACAA AGCCGGTATC
GTTGAATTCG CCCAGTCGCT GTCACAGCGT GGCATTGAAC TGCTCTCAAC CGGCGGTACT
GCACGCCTGC TGGCCAATGC CGGGCTGCCG GTGACGGAGG TTTCCGATTA CACCGGTTTT
CCTGAAATGA TGGATGGACG CGTCAAAACC CTGCATCCCA AAGTGCATGG CGGCATTCTG
GGCCGTCGCG GTCAAGATGA TGCCGTTATG GCTCAGCATC ATATCCAGCC AATCGATATG
GTGGTCGTTA ATCTCTACCC GTTCGCCCAA ACCGTCGCTA AAGCCGACTG TACGCTGGAA
GACGCAGTGG AAAATATCGA TATCGGCGGC CCGACCATGG TGCGCTCCGC CGCCAAGAAC
CATAATGACG TAGCTATTGT TGTTAAAAGC AGCGACTACA CGGCAATCAT CGAGGAGATG
GATGCCAACG ACGGTTCTCT GACTTACGAA ACCCGTTTTG ATCTGGCTAT CAAGGCATTC
GAGCATACCG CCGCTTACGA CAGCATGATC GCCAACTATT TCGGCAGCAA GGTTCCTGCT
TATCACGGTG AAACGACTCA GCCCTCCGGT CGCTTCCCGC GCACGCTGAA TCTGAATTTC
ATCAAAAAGC AGGATATGCG CTACGGCGAG AACAGCCATC AGCAAGCCGC CTTCTATATA
GAAGAGACCG TCGCCGAGGC ATCGGTAGCG ACTGCCCAAC AACTGCAGGG CAAGGCACTT
TCCTACAATA ACATCGCCGA TACCGACGCT GCGCTGGAGT GTGTGAAAGA GTTCGTTGAA
CCGGCCTGCG TCATCGTTAA GCACGCCAAC CCTTGCGGTG TGGCGATCGG CGAGTCTATT
CTGGACGCCT ATGAGCGCGC CTACAAAACC GACCCGACCT CAGCATTCGG CGGCATCATC
GCCTTTAACC GCGAGTTGGA CGAAGCGACT GCGCAAGCCA TTATCAGCCG TCAGTTTGTC
GAGGTGATCA TTGCTCCTTC CGCCAGCGAC GCTGCGCTGA AAGTTACCGC CGCCAAGCAG
AACGTACGCG TACTGATCTG CGGTCAATGG CAACAACGTG CTCCCGGGCT GGATTTCAAA
CGCGTCAACG GCGGCCTGCT GGTGCAGGAT CGCGATTTAG GTATGGTGGA CGCCGCTCAA
CTGCGCGTGG TTACCGAGCG TCAGCCGACG GAAGCCGAGC TGCGCGATGC CCTGTTCTGC
TGGAAAGTCG CGAAGTTCGT TAAATCCAAC GCGATTGTTT ATGCCCGCGA TAACATGACT
ATCGGTATCG GCGCCGGTCA GATGAGCCGC GTTTACTCGG CCAAGATCGC AGGTATCAAG
GCTGGCGACG AAGGGTTGGA AGTGAAAGGC TCCGTGATGG CATCCGACGC GTTTTTCCCG
TTCCGTGATG GTATCGACGC CGCTGCCGCC GTTGGTATCA CTTGCGTCAT TCAGCCTGGC
GGTTCTATTC GCGATGATGA AGTCATCGCC GCCGCCAACG AACACGGCAT TGCGATGTTG
TTTACCGACA TGCGTCACTT CCGTCACTAA
|
|---|
| Protein sequence | MQQRRPIRRA LLSVSDKAGI VEFAQSLSQR GIELLSTGGT ARLLANAGLP VTEVSDYTGF
PEMMDGRVKT LHPKVHGGIL GRRGQDDAVM AQHHIQPIDM VVVNLYPFAQ TVAKADCTLE
DAVENIDIGG PTMVRSAAKN HNDVAIVVKS SDYTAIIEEM DANDGSLTYE TRFDLAIKAF
EHTAAYDSMI ANYFGSKVPA YHGETTQPSG RFPRTLNLNF IKKQDMRYGE NSHQQAAFYI
EETVAEASVA TAQQLQGKAL SYNNIADTDA ALECVKEFVE PACVIVKHAN PCGVAIGESI
LDAYERAYKT DPTSAFGGII AFNRELDEAT AQAIISRQFV EVIIAPSASD AALKVTAAKQ
NVRVLICGQW QQRAPGLDFK RVNGGLLVQD RDLGMVDAAQ LRVVTERQPT EAELRDALFC
WKVAKFVKSN AIVYARDNMT IGIGAGQMSR VYSAKIAGIK AGDEGLEVKG SVMASDAFFP
FRDGIDAAAA VGITCVIQPG GSIRDDEVIA AANEHGIAML FTDMRHFRH
|
|---|
| |