| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3858 |
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| Symbol | |
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| ID | 8118811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4357118 |
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| End bp | 4358296 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644854225 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003006137 |
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| Protein GI | 251791416 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.155428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAAC GCCCAACCGT GAAAGGTGAT TTATCACTGA CTAATCCAGC GGTGCGCGCC
TGGTTGTACC AAATTCTGGC GGTCGTTATC GTTGTGACTA CCGTCGGCTA CCTGCTGCAC
AACACGGTAA CGAATCTGGC ACAGCGCGGG ATTACGTCAG GCTTTGCCTT TCTGAATAAC
AGTGCCGGTT TCGGTATTGT TCAACACCTG ATTGACTATG AACAAGGCGA TACTTACGCC
CGCGTTTTTG TCGTCGGCTT GCTGAACACG CTACTGGTGT CGGCTATCTG TATTATCTGC
GCCTCGCTGC TGGGGTTTAT CGTCGGTCTG TCCCGGCTGT CTGATAACTG GCTGCTGCGT
AAGCTATCAA CAATTTACAT CGAAACGTTT CGTAATATTC CGCCGTTACT ACAAATCTTC
TTCTGGTATT TCGCGGTATT ACGCAACCTA CCCGGTCCTC GTCAGGCGGT GAACGCGTTC
GATACCTTTT TCCTGAGTAA CCGGGGGTTA TATATTCCGG CCGCCGAGTT CGGCCCGGGA
GCGCTGCCGT CTTTCCTCGT GCTGCTCATT TCGCTGGGAT GTGCCGTCGC GCTGCATCGC
CGCAATAAAC GCTACCATGA ATTAACCGGT CAGCAACGTC GTTATTGGCC TATTCCTCTG
GTCATGCTGA TAGTCCTGTT GGGGCTGTCT CATTTGATCT TTGGCCAGGC ACTGCATGGG
GATTTTCCGG TACTGAAAGG GTTTAACTTT AACGGCGGCC TGGTACTGAT CCCCGAACTG
GCCGCGCTGG CGCTGGCATT ATCGGTATAT ACCTCGTCGT TTATCGCCGA GATCATTCGT
TCCGGTATCC AATCCGTCTC CCATGGACAA CATGAAGCGG CGTTGTCGTT GGGCCTGCCC
AAGCCGGTTA CGCTGCGTAA GGTTATTCTG CCGCAGGCAC TGCGCGTGAT TATTCCGCCA
TTGACCAGCC AGTACCTAAA CGTGGTGAAA AACTCTTCAC TGGCCGCCGC AATTGGCTAT
CCCGATATGG TGTCGCTATT TGCAGGCACG GTGCTGAATC AGACCGGTCA AGCGATTGAA
ACCATCGCCA TCACCATGTC GGTCTACCTG ATTATCAGCC TGCTGATCTC ATTACTGATG
AACATCTATA ACCGGAAAAT CGCCTTAATT GAGCGTTAA
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| Protein sequence | MLQRPTVKGD LSLTNPAVRA WLYQILAVVI VVTTVGYLLH NTVTNLAQRG ITSGFAFLNN
SAGFGIVQHL IDYEQGDTYA RVFVVGLLNT LLVSAICIIC ASLLGFIVGL SRLSDNWLLR
KLSTIYIETF RNIPPLLQIF FWYFAVLRNL PGPRQAVNAF DTFFLSNRGL YIPAAEFGPG
ALPSFLVLLI SLGCAVALHR RNKRYHELTG QQRRYWPIPL VMLIVLLGLS HLIFGQALHG
DFPVLKGFNF NGGLVLIPEL AALALALSVY TSSFIAEIIR SGIQSVSHGQ HEAALSLGLP
KPVTLRKVIL PQALRVIIPP LTSQYLNVVK NSSLAAAIGY PDMVSLFAGT VLNQTGQAIE
TIAITMSVYL IISLLISLLM NIYNRKIALI ER
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