| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3838 |
|---|
| Symbol | |
|---|
| ID | 8118791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4339427 |
|---|
| End bp | 4340428 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644854205 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_003006117 |
|---|
| Protein GI | 251791396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00559103 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAC ATCGCAAACT AACCGACGCC GACGTGACGC CGGAATCACT GTTCCATCAG
CGCCGCACCG TTCTCAAGGC GCTGGGTCTT ACCGCCGCCA CACTGAGCCT GCCGTCCGGC
GCCCGCGCCG ACCTGCTCAA CTGGTTCAAG GGAAAGCCGG CCCCTGTTGC CCCGCCCGGT
AAACCGCTGA CGTACAGTCA GCCGCCGCAG TGGCACCCTG ATCTGGCGTT AACGCCGGAA
GACAAGGTCA CCGGTTATAA CAATTTCTAC GAATTTGGTC TGGATAAAGC CGACCCTGCC
GCTAACGCGG GCGGCCTCAA GACCGAAAGC TGGAAGGTGC GGATTGACGG TGAGGTCGCC
AAGCCCATCA CGCTGGACAT CGACGACATT CGGCGCCGTT TCCCGCTGGA AGAACGCATC
TACCGCTTTC GCTGCGTCGA AGCCTGGTCG ATGGTGGTGC CGTGGGTCGG GTTCGAACTG
GCGCAATTGA TAAAACTGGC CGAACCGACC GGTAGTGCGC GTTACGTCGC TTTCCAGACC
CTGTATGACC CGGCGCAAAT GCCCGGCCAG AAAGACGGTT TTATCGGCGG CGGTCTCGAT
TACCCCTATG TCGAAGGGCT GCGTCTGGAT GAAGCCATGC ACCCGCTGAC CTTGCTGGCG
GTCGGTGTTT ACGGCAAAAC CTTGCCGCCG CAAAACGGCG CGCCGATACG GCTGGTTACG
CCGTGGAAAT ACGGTTTCAA GAACATCAAA TCCATCGTGC ATATCACCCT GACGCGACAA
CAGCCGCCCT CCACCTGGAA TCTGACCGCG CCTAATGAGT ACGGGTTCTA CGCCAATGTG
AACCCAAACG TTGATCATCC ACGCTGGTCA CAGGCCAGCG AACGGGTCAT CGGCGCCGGC
GGATTGCTGA ATGTGCAACG CCAGCCGACG CTCTTGTTCA ACGGTTACGC CGATCAGGTG
GCGTCGTTGT ATCAGGGACT GGATTTACGG GCCAACTTCT AA
|
|---|
| Protein sequence | MSRHRKLTDA DVTPESLFHQ RRTVLKALGL TAATLSLPSG ARADLLNWFK GKPAPVAPPG
KPLTYSQPPQ WHPDLALTPE DKVTGYNNFY EFGLDKADPA ANAGGLKTES WKVRIDGEVA
KPITLDIDDI RRRFPLEERI YRFRCVEAWS MVVPWVGFEL AQLIKLAEPT GSARYVAFQT
LYDPAQMPGQ KDGFIGGGLD YPYVEGLRLD EAMHPLTLLA VGVYGKTLPP QNGAPIRLVT
PWKYGFKNIK SIVHITLTRQ QPPSTWNLTA PNEYGFYANV NPNVDHPRWS QASERVIGAG
GLLNVQRQPT LLFNGYADQV ASLYQGLDLR ANF
|
|---|
| |