Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3833 |
Symbol | |
ID | 8117266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4333060 |
End bp | 4333548 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644854200 |
Product | rod shape-determining protein MreD |
Protein accession | YP_003006112 |
Protein GI | 251791391 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0335584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCT ATCACCGACA CGGTCACTGG ATTATCTGGC TCTCTTTTTT GGTGGCGATG GTGCTGCAAA TCATGCCCTG GCCGGATGAG CTTTATATGT ATCGCCCCTC CTGGCTGACC TTGATCCTGA TTTACTGGGT GATGGCGCTG CCGCACCGGG TTAATGTCGG CACCGGGTTT GTGTTGGGGA TGATCACCGA CCTGATTCTC GGTTCTACGC TGGGGGTTCG GGCGTTGGGG CTGAGTATTG TCGCCTATCT GGTGGCGTTC AAATTCCAGT TGTTCCGTAA TATGGCGTTG TGGCAGCAGG CGCTGATCGT TATGTTGCTG TCGCTGGTAT TGGATTTACT GGTGTTTTGG GCAGAGTTCC TGGTGATCAA TGTCTCTTTA CGGCCGGAAA TTTTCTGGAA TAGTGTTGTC GACGGCGTGC TATGGCCGTG GCTGTTCCTG CTGATGCGCA AGATTCGCCG CCAGTTTGCC GTTCAATAA
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Protein sequence | MNSYHRHGHW IIWLSFLVAM VLQIMPWPDE LYMYRPSWLT LILIYWVMAL PHRVNVGTGF VLGMITDLIL GSTLGVRALG LSIVAYLVAF KFQLFRNMAL WQQALIVMLL SLVLDLLVFW AEFLVINVSL RPEIFWNSVV DGVLWPWLFL LMRKIRRQFA VQ
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