Gene Dd1591_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3801 
Symbol 
ID8117234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4303312 
End bp4304376 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content54% 
IMG OID644854168 
Productserine endoprotease 
Protein accessionYP_003006080 
Protein GI251791359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000336047 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCA AACTGTTACG TTCGGCGCTC TTCGGTGTCA TCGTGGCTGG CATCCTGTTG 
CTAACCATCC CGACACTGCG CTCCAGCCAG GGCTGGTTCA AACCCAGCAG CGACAGCAGC
CAGGAAAACC CGGTCAGTTA CTACCAGGGA GTCCGTCGTG CTGCACCCGC CGTGGTGAAC
GTATACAATC AGGCCAACGA TCCGAGAACC CAAAGCGAAA TGAACGTCCG CACGCTGGGT
TCTGGCGTGA TAATGAACAA TAAAGGGTAC ATCCTGACCA ACAAGCATGT GATCAGTAAT
GCTGAGCGAA TTGTGGTTAC ACTGCAGGAT GGCCGTATGT TCGAAGCGCT GCTGGTAGGC
TCAGACAGCC TGACGGATTT GGCGGTACTG AAAATTGAAG GTGCCAATCT GCCGGAAATT
CCCATCAATC CCAAACGGGT ATTTCATGTC GGCGACGTCG TGATGGCTAT CGGTAACCCC
TATAACCTCG GCCAGACGGT GACGCAAGGG ATTATCAGCG CGACCGGTCG GGTTGGGCTA
ACGCCATCCG GTCGACAGAA CTTTCTGCAA ACCGATGCGT CCATTAATCG CGGCAACTCC
GGTGGCGCGC TGATTAACAC ACAGGGCGAA CTGGTCGGCA TCAATACCTT GTCATTTGAC
AAAAGCGATG ATGGCGGCAC CCCGGAAGGT CTCGGTTTTG CCATACCCAC TGCACTGGCA
ACCAAGATCA TGAATAAGTT GATCCGTGAT GGTCGGGTAA TTCGCGGTTA TATCGGCATC
CGTGGCGCCC AGCGTGAACA GTTGGGCAAT CAGGTGATTG GTCTGGAACG GTTGCAGGGT
ATCGTCGTCA GTAAGATAGA CGACGGTGGT CCGGCAGATA AAGCCGGGAT GAAGGAAGGC
GACTTGCTGT TGGAAGTGAA TAACAAACCC GCCCGATCGG TGCTGGAAAC CATGGATCAG
GTGGCGGAAA TTCGCCCTGG TTCGGTCATT CCAGTGGTTA TTTTACGGGA TAATCAGGAA
ATAAAACTGA ATATGACCAT CCAGGAATAC CCCACCACCG ACTGA
 
Protein sequence
MLTKLLRSAL FGVIVAGILL LTIPTLRSSQ GWFKPSSDSS QENPVSYYQG VRRAAPAVVN 
VYNQANDPRT QSEMNVRTLG SGVIMNNKGY ILTNKHVISN AERIVVTLQD GRMFEALLVG
SDSLTDLAVL KIEGANLPEI PINPKRVFHV GDVVMAIGNP YNLGQTVTQG IISATGRVGL
TPSGRQNFLQ TDASINRGNS GGALINTQGE LVGINTLSFD KSDDGGTPEG LGFAIPTALA
TKIMNKLIRD GRVIRGYIGI RGAQREQLGN QVIGLERLQG IVVSKIDDGG PADKAGMKEG
DLLLEVNNKP ARSVLETMDQ VAEIRPGSVI PVVILRDNQE IKLNMTIQEY PTTD