| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3800 |
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| Symbol | |
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| ID | 8117233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4301855 |
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| End bp | 4303225 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644854167 |
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| Product | protease Do |
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| Protein accession | YP_003006079 |
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| Protein GI | 251791358 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00053297 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CATCGTTGTT ATATAGCGCA CTGGCACTCG GTATTGGACT GTCGTTATCT
TCACTGCCTT CAGCCAACGC CGCGTTGCCT GCCGTCGTAG AAGGTCAGGC ACTGCCCAGC
CTGGCGCCGA TGCTGGAAAA AGTACTGCCC GCCGTCGTGA GCGTGCATGT GGAAGGTACG
CAGGTGCAGC GTCAGCGCAT CCCGGAAGAG TTTAAATTCT TCTTCGGCCC TAACACTCCA
TCCGAAAAAC AGAATACTCG CCCGTTTGAA GGACTGGGTT CCGGCGTCAT CATCAACGCC
GAAAAAGGCT ATGTGTTGAC CAATAACCAC GTCGTCAACA ACGCAGATAA AATCCAGGTG
CAGTTGAATG ACGGTCGTGA ATATGATGCC AAGTTGATCG GCCGCGATGA GCAGACCGAT
ATCGCCCTGT TGCAGTTAAG CGACGCCAAG AACCTCACCG AAGTCAAACT GGCTGATTCC
GATCAGTTGC GCGTCGGTGA CTTCGCGGTT GCCGTCGGCA ACCCATTCGG ACTCGGCCAA
ACGGCAACGT CCGGCATCAT TTCTGCGTTG GGTCGTAGCG GGTTGAATCT GGAAGGATTG
GAAAACTTCA TCCAGACCGA TGCTTCCATC AACCGCGGTA ACTCCGGCGG AGCGTTGGTT
AACCTGCGAG GCGAATTGAT CGGCATTAAT ACCGCAATTC TGGCGCCAAG CGGCGGCAAC
GTGGGCATCG GCTTTGCCAT TCCAAGCAAC ATGGCGCAGA ATTTGGCGCA ACAGTTAGTG
GAATTCGGTG AAGTGAAACG CGGCCTGCTG GGTATCAAGG GCAGCGAGAT GACCTCTGAA
ATCGCAAAAG CCTTCAAGGT TGAGGCCCAG CGCGGCGCTT TCGTCAGCGA GGTGATTCCG
AAATCAGCGG CGGCCAAAGC AGGCATTAAA GCCGGCGATG TGTTGGTTTC TCTGGATGGC
AAGCCCATTA ATAGCTTTGC CGAGTTACGC GCCAAAGTCG GCACCACCGC ACCGGGTAAA
ACCGTGCGCA TCGGCCTGCT ACGTGACGGG AAACAACAAG AAGTCGCAGT GGTACTGGAC
AATAGCGCCA ACGTCACGAC AAACGCAGAC ACCTTGTCCC CAGCCTTGCA GGGCGCCACC
CTTAACAACG GTCAGTTGAA AGACGGCAGT AAAGGCGTGG TGATCGACAA TGTGGGCAAA
GATAGTGCAG CCGCTAAAGT CGGCTTGCAA AAAGGCGACA TTATCGTCGG CGTGAACCGT
GAACGCGTAG AAAACATCAC TCAGTTGCGC AAAATTCTGG AAGCCAAACC CTCGGTCTTG
GCCCTGAACA TTGTTCGCGG CGATGAGAGT ATCTATCTTC TGCTGCGTTA A
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| Protein sequence | MKKTSLLYSA LALGIGLSLS SLPSANAALP AVVEGQALPS LAPMLEKVLP AVVSVHVEGT
QVQRQRIPEE FKFFFGPNTP SEKQNTRPFE GLGSGVIINA EKGYVLTNNH VVNNADKIQV
QLNDGREYDA KLIGRDEQTD IALLQLSDAK NLTEVKLADS DQLRVGDFAV AVGNPFGLGQ
TATSGIISAL GRSGLNLEGL ENFIQTDASI NRGNSGGALV NLRGELIGIN TAILAPSGGN
VGIGFAIPSN MAQNLAQQLV EFGEVKRGLL GIKGSEMTSE IAKAFKVEAQ RGAFVSEVIP
KSAAAKAGIK AGDVLVSLDG KPINSFAELR AKVGTTAPGK TVRIGLLRDG KQQEVAVVLD
NSANVTTNAD TLSPALQGAT LNNGQLKDGS KGVVIDNVGK DSAAAKVGLQ KGDIIVGVNR
ERVENITQLR KILEAKPSVL ALNIVRGDES IYLLLR
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