| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3777 |
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| Symbol | tolC |
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| ID | 8117209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4272467 |
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| End bp | 4273879 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644854144 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_003006056 |
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| Protein GI | 251791335 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC TGCTCCCACT TCTCATCAGC CTGAGTCTGG GTGGATTTAC TGCCGCCAGT
CAGGCCGAAG ACCTGCTACA GGTTTATCAG CAGGCTAAAA CGACCAATCC GGATTTACGC
AGCGCCGCCG CCACCCGAGA CGCGGCTTTC GAAAAAATTA ATGAAGCGCG CTCTTCCTTG
CTGCCTCAAC TGGGTTTGGG CGCCGACTAC ACCTACAACA GCGGCTACCG CGACCGCAAA
GACATTAACA GCAATGCGAC CAGCGCTTCG CTGCAGCTCA CCCAGTCAAT CTTTAATATG
TCGCTGTGGC GTGCCTTGAC GCTGCAGGAA AAACAGGCCG GTATTCAGGA CGTCAGCTAT
CAAACCTCCC AGCAGACGCT GCTGCTGAAC ACCGCAACCG CCTACTTCAA CGTACTGCGC
GCGATCGACT CGCTGTCTTA CGTTAGCGCA CAAAAACAGT CGATCTACCG CGAACTGGAT
CAAACCACTC AGCGTTTCAA CGTCGGTTTG GTTGCCATCA CCGACGTACA GAACGCGCGT
GCCCAGTATG ACAACGTGCT GGCGAGCGAA GTGACCGCCC GCAACAATCT GGATAACGCC
ATGGAAACCC TGCGTCAGGT AACCGGTCAA TTCTATCCGC AACTGGCGGG ACTGAATATT
GACCGCTTCG CGCCGCAGAA ACCCGACGTG GTGAACAGCC TGCTGAAAGA AGCGGAAAAC
CGTAATCTCA GCCTGTTGTC GGCCAGACTG AGCCAGGATC TGGCTCGCGA GCAGATTCGC
TCGTCGGAAA GCGGCCATCT GCCGACACTG AACCTGACGG CATCCACTGG CGTCACCAAC
ACCAACTATT CCGGTTCCAA CGCGGTCGGC AACAATTTTA ACGACACCTA CGTGGGCCAG
AATCAGGTCG GTCTGAGCTT CTCGTTACCG ATCTACAGCG GCGGCGGCAC GTCATCCAGA
GTGAAACAGG CGCAGCACAG CTTTGTCGCT TCCAGTGAGA ACATGGAAAG CGCGCACCGT
TCGGTGATCC AGACGCTGCG TTCCGCACAT AACAACATTT CCGCCTCCAT CAGTAGCGTC
AACGCTTACA AACAGGCGGT AGTCTCCGCA CAGAGCTCGC TGGATGCGAT GGAAGCCGGT
TATCAGGTGG GGACTCGTAC CATCGTTGAC GTGCTGGACG CCACCACCAC GCTGTACAAC
GCCAAACAGC AATTGTCCGG CGCACGTTAT GACTATCTGA TTAACCAGTT GAACCTCAAG
CAAGCGCTCG GTACGTTGAA TGAAGACGAC CTGCGTACGC TGAACGCCAT GCTGGGTAAA
CCGGTTTCTA CGTCTGCCGC CATCGGCGAC GATGCGCCGG CACCGGCCGC AACCCCGGTC
ACGGCCAAAC CCCCCGCCAA GGCCAAGCCC TAG
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| Protein sequence | MKKLLPLLIS LSLGGFTAAS QAEDLLQVYQ QAKTTNPDLR SAAATRDAAF EKINEARSSL
LPQLGLGADY TYNSGYRDRK DINSNATSAS LQLTQSIFNM SLWRALTLQE KQAGIQDVSY
QTSQQTLLLN TATAYFNVLR AIDSLSYVSA QKQSIYRELD QTTQRFNVGL VAITDVQNAR
AQYDNVLASE VTARNNLDNA METLRQVTGQ FYPQLAGLNI DRFAPQKPDV VNSLLKEAEN
RNLSLLSARL SQDLAREQIR SSESGHLPTL NLTASTGVTN TNYSGSNAVG NNFNDTYVGQ
NQVGLSFSLP IYSGGGTSSR VKQAQHSFVA SSENMESAHR SVIQTLRSAH NNISASISSV
NAYKQAVVSA QSSLDAMEAG YQVGTRTIVD VLDATTTLYN AKQQLSGARY DYLINQLNLK
QALGTLNEDD LRTLNAMLGK PVSTSAAIGD DAPAPAATPV TAKPPAKAKP
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