| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3760 |
|---|
| Symbol | |
|---|
| ID | 8117192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4253486 |
|---|
| End bp | 4253905 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644854127 |
|---|
| Product | TonB system transport protein ExbD |
|---|
| Protein accession | YP_003006039 |
|---|
| Protein GI | 251791318 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGC ATCTGAACGA CGGGCAGAGT GAAAATGGTG AAATGCATGA CATCAACGTG
ACGCCGTTTA TCGACGTCAT GCTGGTGTTG TTAATCATCT TCATGGTGGC CGCGCCGCTG
GCAACGGTAG ACGTGCGGGT CAATTTGCCG GCTTCCAGCG CTACGCCGCA ACCGCGCCCG
GAAAAACCGG TGTTTCTGAC GGTGAAAGCG GATAAACAAC TTTACCTGGG CGACGATGCG
ATTACCGAAG CGACGCTGGC CCAGGTGCTG GAAAGCAAAA CGCAGGGTAA CAAAGACACC
ACCATTTTCT TTCAGGCGGA CAAAAGCGTC GATTATGAAA CCCTGATGCG GGTGATGGAT
TCGCTGCGTG AAGCGGGGTA TCTCAAAATC GGCCTGATGG GGTCGGAGAA AGTGCGCTGA
|
|---|
| Protein sequence | MAMHLNDGQS ENGEMHDINV TPFIDVMLVL LIIFMVAAPL ATVDVRVNLP ASSATPQPRP
EKPVFLTVKA DKQLYLGDDA ITEATLAQVL ESKTQGNKDT TIFFQADKSV DYETLMRVMD
SLREAGYLKI GLMGSEKVR
|
|---|
| |