Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3745 |
Symbol | |
ID | 8120744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4235067 |
End bp | 4236011 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644854113 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003006025 |
Protein GI | 251791304 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATTC TGCGGCGTCT GCTGGCGGGG GTGGCGATGG TGGCGGTGGT ATCGGTGTTG ATTTTCGCCG GTATCCAACT GCTGCCGGGC AATGCTGCGA CCGCCATTCT CGGGCAGACG GCGACGCCGG AAGCCGTACG AGCGCTCAAT GCGCAGTTGG GGCTGGATCA GCCGGCGTTT TCCCGTTATC TCGGCTGGTT GTGGGGCGTG CTCGGCGGTG ATTTCGGCCA GAGCTTTACC AGCCGTCAGG CGATTGCGCC GGTGCTGGCG TACCGGTTGG AAAACACGCT GTTTCTGGCC GGGTGCACGG CGGTGGTCGC GGTGCCGCTG GCGCTGCTGA TAGGCTTTCT GTCGGTGCGT TATCAGGGGA GCTGGCTGGA CCGACTACTC AACCTGTTTA CCCGCGTCGC AGTGGCCTTG CCGGAATTTT TCTCCGGCTA TTTATTGATT CTGATTTTTT CCATCACCTT GTTCTGGCTG CCGAGCAACA GCAACGTCAG CGACAATATG CCGCTTGGCG CCCATCTGAC GGCTATCGCG CTACCGTGCA TGACGCTGGT GCTGGCGGTG TTGGGCCACA TGAGCAATAT GACTCGCGCA GCGCTGATAG GCGCGCAAAA TGCCGCTTAT GTCGATACGG CATTGCTGAA AGGAATGTCG CCTTCGGCTA TCCTGCTGCG CCACGTACTG CCGAATGCCT GGGGGCCGAT CATCAACGTT ATCGTGCTTA ACCTGGCCTA CCTGATGGTC GGGGTGGTGA TCGTTGAAAG CGTGTTTGTT TACCCGGGGC TGGGGCAGTA CATGGTCGAT AGCATCAGCA AACGCGATAT GCCGGTGATT CAAGGCTGCG CGCTGGTGCT GGCGACGATT TACATCCTGC TGAATTTGTT GGCGGATGTG GTCTCGCTAA TGGCGAATCC CCGCTTGCGT CATGCCCGGC GGTAA
|
Protein sequence | MLILRRLLAG VAMVAVVSVL IFAGIQLLPG NAATAILGQT ATPEAVRALN AQLGLDQPAF SRYLGWLWGV LGGDFGQSFT SRQAIAPVLA YRLENTLFLA GCTAVVAVPL ALLIGFLSVR YQGSWLDRLL NLFTRVAVAL PEFFSGYLLI LIFSITLFWL PSNSNVSDNM PLGAHLTAIA LPCMTLVLAV LGHMSNMTRA ALIGAQNAAY VDTALLKGMS PSAILLRHVL PNAWGPIINV IVLNLAYLMV GVVIVESVFV YPGLGQYMVD SISKRDMPVI QGCALVLATI YILLNLLADV VSLMANPRLR HARR
|
| |