| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3717 |
|---|
| Symbol | |
|---|
| ID | 8120715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4203430 |
|---|
| End bp | 4204689 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644854086 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003005999 |
|---|
| Protein GI | 251791278 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA ATGCCCGTCA GGTCGAGACT GCCAAGCCCA AAGAGAAAAC CTACAAGATG
GCGGATGGGG GCGGCTTATA CCTTGAGATT ACCCCACGCG GTTCAAAATA CTGGCGCATG
AAGTATCGGC GTCCAGATGA CAAGAAAGAA GACCGGCTGG CTTTTGGTGT TTGGCCGACA
GTCACCCTGG CTGAGGCTCG TGCTAAACGT GATGAAGCTA AAAAGCTGCT GGTGCAAGGT
ATTGACCCAA AGGCTGAACA AAAAGAGGCA CAGGCTGAAA CTGCGGGGGC GTATACCTTT
GAGACTATCG CCCGGCAGTG GCACGCCAGC AACAAGCGCT GGGGCGATTA TCACCGCGCA
CGGGTGATGC GTTATCTTGA ACTGTACATT TTTCCGCATA TTGGCACGGC AGATATCCGT
AAACTCAAAA CCAGCCATCT GTTAGCACCG ATAAAAGCGG TGGATGCCAG CGGCAAGCAC
GATGTAGCAC AACGCTTGCA ACAGCGTGTT ACGGCGATTA TGCGCTATGC CGTGCAGAAC
GATTATATTG ACTCTAACCC GGCCAGTGAC ATGAGCGGGG CATTAACGAC GACAAAAGCA
CGGCACTATC CCGCCTTGCC GCCGGAACGT CTTCATGAGT TCCTGTCACG TCTTGCGGCT
TATCGTGGCC GCCAGATGAC ACGTATCGCA GTCGAACTCA CGTTGCTGAC GTTTGTACGT
TCCAGCGAGC TTCGTTTTGC CCAATGGCGG GAGTTTGATT TTGATAAGGC TTACTGGCGG
GTTCCGGCAC AGCGGGAAGC GATCAAAGGT GTGCGTTACT CCTATCGTGG CATGAAGATG
AAGGAAGAGC ACATCGTGCC GCTCAGTCGT CAGGCTGTAG CGCTGCTGGA GCAGTTAAAG
GCAATTAGCG GCGACAACAA ATGCCTTTTC CCAGGTGATC ATGACCCGGA AAAAGTGATG
AGCGAAAACA CGGTCAATAA TGCGCTGCGA GCAATGGGTT ACGATACGCA AACCGAAGTT
TGCGGACACG GTTTCAGAAC GATGGCGCGA GGCGCGTTAG GGGAATCTGG CCTGTGGAGT
GACGACGCAA TAGAGCGTCA GCTAAGTCAT TCTGAGCGGA ACAATGTCCG GGCGGCTTAC
ACTCACACTT CTGAGTATCT GGATGAGCGG CGGTTAATGG TGCAGTGGTG GGCGGATTAT
CTTGATGCAA ATCGTGAGTG GTATGTTACT GCTTATGATT TTGGTAAGCT TACAAGATAA
|
|---|
| Protein sequence | MKLNARQVET AKPKEKTYKM ADGGGLYLEI TPRGSKYWRM KYRRPDDKKE DRLAFGVWPT
VTLAEARAKR DEAKKLLVQG IDPKAEQKEA QAETAGAYTF ETIARQWHAS NKRWGDYHRA
RVMRYLELYI FPHIGTADIR KLKTSHLLAP IKAVDASGKH DVAQRLQQRV TAIMRYAVQN
DYIDSNPASD MSGALTTTKA RHYPALPPER LHEFLSRLAA YRGRQMTRIA VELTLLTFVR
SSELRFAQWR EFDFDKAYWR VPAQREAIKG VRYSYRGMKM KEEHIVPLSR QAVALLEQLK
AISGDNKCLF PGDHDPEKVM SENTVNNALR AMGYDTQTEV CGHGFRTMAR GALGESGLWS
DDAIERQLSH SERNNVRAAY THTSEYLDER RLMVQWWADY LDANREWYVT AYDFGKLTR
|
|---|
| |