| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3708 |
|---|
| Symbol | |
|---|
| ID | 8120706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4197660 |
|---|
| End bp | 4198199 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644854078 |
|---|
| Product | prophage protein |
|---|
| Protein accession | YP_003005991 |
|---|
| Protein GI | 251791270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT CAGCTTTTCT TCTGGCGGGC AAATTGGGCT ATACTGCGCG GGCTACGGCA
AAATCCGTAG CCGGAATTGG CGTTCCGACG ATTACCACGG TGTCTAAAAA ACACGTACAT
CATGTTGCGT GTTTTTTTAT AGACAGTGCT TGCGCACACC TGTCAATGGT GGCTCAGGCG
GGGGCTCCGA AAGGAGCGCC GGAGCCCGTG GTAGCCGGTT ACGCCAACCC CGTCTGGGCT
ACCACCCACG GGATTGGCGT CTCAGGTGGT GGCTGTTTTC TGCTTACCAC GGAGGCTGCC
TTATGGCTAC GACCCTTAGC TATTCCTGCC TGCAATCTTT CACCTCTCCT GCGGAGGTGC
GCTATGTATA ACCCCACACC GCTGTTACTG GAAGAGATCG CCGATCACTG CCGGGTGCTG
GCCTACGCCA TCATTGAGCT GGAAAACCCC GTTGCCAAAG AGCTGCTGAT GTTCATCTTA
TGGGAGCGGC TTAACCTGCT GAATGACACG CTGGATGCGG AGGTGCCGGA CAATGAGTAA
|
|---|
| Protein sequence | MSHSAFLLAG KLGYTARATA KSVAGIGVPT ITTVSKKHVH HVACFFIDSA CAHLSMVAQA
GAPKGAPEPV VAGYANPVWA TTHGIGVSGG GCFLLTTEAA LWLRPLAIPA CNLSPLLRRC
AMYNPTPLLL EEIADHCRVL AYAIIELENP VAKELLMFIL WERLNLLNDT LDAEVPDNE
|
|---|
| |