| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3671 |
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| Symbol | hsdR |
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| ID | 8117502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4159901 |
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| End bp | 4163425 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644854045 |
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| Product | type I restriction enzyme EcoKI subunit R |
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| Protein accession | YP_003005958 |
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| Protein GI | 251791237 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACAGA CCGCACCCCA GCCTGCGGGC AATTTTGGCT TTCTTGCCGA GCATGACCCT
CTCTTCGCCC AAATTGCGGC GGCGGCCGAG CAAGCCTTTT ACAGCGACCC CAACACCACA
CTGATCAAGC TACGCCAGTT AGGCGAAGCG CTGGCGCAGC ACCTTGCTAC GTTATCCGGC
ATCACGTTTG ATGAAAAAAC CAAACAGGTG GACCTGCTTT ATCAACTGAA CCGGGAATTA
CAGCTGGAAC CCACGGTGCG GGAGCTCTTC CATATCCTGC GGATGGAAGG CAACCGGGCG
ACACACCACT TCAGAACCCA GCATAAAGAA GCGATGGATG GGCTTAAAGT CGCCCGTTCA
CTGGCTATCT GGTTCCACCG TTCCTTGGGT AAACAAGGGG CGGATTTCAA AGCCGGGCCA
TTTGTTCCAC CGTCCGACCC CAGCGCACAA CTGCGTCAGT TGCAGACAGA AATCGAAACA
CTGAAAAACG ACCTGCTGTC AGCCAGTATC CAGCTCGAAT CCAGCCAGCA ATTGCAGCTA
TTACTGGGTA AGGAAAAAGC CGAATACGAA GCACTGGCAC TGGAGATGGA TCAGGAAGCC
AGAGCGTTGG CGAAACAGGC GCAAGCCCAT GCCGCCGAAC TACAGCAACT CCAGCAAGAC
TACGAAAGCA GGCTCAGAAC GTTACAAGCG CAACTGACCG CCAAAAATGA GCAACAGCGC
AACCAGCAAA AGCAGCGCGC CGCGCGACAA ACCCGTCAGG CCAGCCAAAA GATTACGCTG
ACCGAAGAAC TGACGCGCAT TCTTATCGAT CAGTCCTTAA ACGAGGCGGG CTGGCAAACC
GACAGCCAGA CGCTCAGTTG GGTGAAAGGC GCCCGTCCGG AAAAAGGCGT GAACAAAGCG
ATTGCCGAAT GGCCAACGCG CCACAACGGT GAGAAAGGCC GTGCCGATTA TGTGCTGTTT
TATGGGCTCA CCCCCATCGC CGTGGTGGAA GCCAAACGGC AGAATGAAAA CGTCGCCGGT
AAAATTCCGC AGGCAGAGCG CTACAGCAAA GGCTTTCAGG TAGAGCCCCC GTTAACCGCC
GCCTGGGAAC TGGAAGGGCG CAGCATCGCC TGGGCCGACG ACACAGAAGG GCATTACCAC
ATCCCTTTTG TTTACTCCTG CAACGGCCGC GCCTACCTAG CGCAACTGGC GGAACAATCC
GGCACCTGGT TTCGGGATGT ACGCGAGCCC GGCAACCTGC GGCGTCCGCT GCCGCAATTT
CACACCCCGG AAGGGCTGCT TGACCTGCTC AAACGCAGCA GGCAACAAGC CGAGGAAAAA
CTCAGCCAAG AAGGGTTGTC TTATCTGCGT CTGCGTGAAT ATCAGGAACG TGCGATCACC
GCGGTGGAAA CCACGCTGGC GCAGAACATC CGCACCGCCC TGCTGGCGAT GGCGACCGGC
ACCGGCAAAA CACGCACCAT CATCGGCCTG ATTTACCGCT TTCTGAAAAC CGAGCGCTTC
AAGCGCATTC TGTTTTTGGT TGATCGCACC GCACTGGGCA AACAGGCCAC CGAAAACTTC
AAAGAAACCA CGCTGGAACA AAACCAGTCC TTGTCGCAAA TCTACAACAT CGCGGAACTG
GGCGACATGG CCCCGCAGGC GGAAACCCGC GTGCAGGTCG CCACGGTGCA GGCGATGGTC
AGCCGGGTGT TTGCCAGCGA CACCCCGCCG CCAATCGACC AGTACGACTG CATCATTGTG
GATGAAGCCC ACCGGGGTTA CACGCTCGAT CAGGAAATGA CCGAAGGTGA GCTTGCCACC
CGCGACGCCG CCCAGTATCT CTCCAGCTAC CGCCGGGTGC TGGATTACTT TGATGCGGTA
AAAATAGCGT TGACCGCCAC ACCGGCCAAA CACACCAGCG ACATCTTTGG CCGCCCGGTG
TTTGTTTATT CTTACCGGGA AGCCGTCGCT GATGACTGGC TGATCGACTA CGAACCGCCG
ATTCGCTACC TGACACAGCT CAACCAGCAC GGTATCCATT TCGAAAAGGG CAGCCAGGTC
CGCGCGATCA ATATCGACAC TGGTGAGTTG GAAATAGACC AGTTGGAAGA CGACCTGCAT
TTTGATGTTG ATGCGTTTAA CCGCCGGGTC ATCAACGAAA ACTTCAACAG CGTTATCTGC
AACGAACTGG TCAAAGAGCT TGACCCATTT GGCGAAGGCA AAACCCTGAT TTTCTGCGCC
ACCGACAAAC ACGCCGATAT GGTCAAACGC CTGCTGGATG AAGCGTTCAC CGCCATCTAT
CCCGACTACA ATCAGGCGGC GGTGGAGAAA ATCACCGGCA AAAGCGACAA AGTCGATACG
CTAATCAGCC GTTATAAAAA CGAGCGCTAC CCTAACATCG CCATCACGGT GGACCTGCTC
ACCACCGGCA TTGACGTGCC GAAAATCAGC AACCTGGTGT TTATGCGCCG CGTGCGTTCG
CGCATCCTGT TTGAACAGAT GATCGGCCGC GCCACCCGCC GCTGCGACAA CATAGGCAAA
ACCGTATTCC GTGTTTACGA CCCGGTGGAT ATCTTCGAAG CGCTGCACGA CGCCAACACC
ATGAAACCGT TGGTCAAAAA CCCCGACATC ACGCTGGAAC AACTGGTGCG GGAACTGACC
GACGCCGAGC TACTGGAAAC CGCGCTCGCC AGCCCCGGTG AACAAGCGGG AGAAAACCAG
GCCGATGCGG TATTAACCCA CCTCAGCCAG AAACTGATGC GGGTGTTACG CAAAGCGGAA
AAGCGCGCCG AAACCCAACC ACAGGTCAGG CAAAAGCTCG ACGAGCTGGA GCAGTTGTGG
GGCATTGCGC CCAAAAACCT GCATCAGCAC CTGCACCACA TCGGGCCGCG TCAGGCTGCC
GGGTTCCTGC GCCGGCACAG TAACCTGACG ACCCAGCTCA ACGACGTCGC CCATCTGCTG
GGCAGCGATT ACCGCCCGGT CATCTCCGAG CACCACGACG CCTTGCTCGA GCGCCACCAG
TCTTACGGCA CCCATTCACG GCCGGAAGAT TACCTCAACA GCTTCAACGC GTTCATTCAA
ACCCAGCTTA ACCAGTCTGT GGCGCTTGCC GTGGTGGTCA ACAAACCGCG CGACCTCACC
CGCGAGCAGT TGAAAGAAAT CCGCCTCCTG CTCGACAACG CCGGTTATTC GGAGACCCAC
CTGCAAACGG CGGAGCGCAA TCAGAGCAGT CAGGATATCG CCGCCAGCAT CATCGGGCAT
ATTCGCCGGG CGGCCATCGG CGAGCCGTTG ATCCCGTTCG AACAGCGTGT CGATCAGGCA
ATGGCGAAAA TCTACCGGCT GCATAACTGG AGCCCGGTGC AACGCAACTG GCTGCAACGG
CTGGCCAAAC AGCTGACGTT CGAAGTGGTG CTGGACCGGC CGACCCTCAA CCGCTGCTTT
GCCACCACCG GTGGCGTCAA AGGGCTGGAC AAACTGCTGG ACCAGCATCT GGACGAGGTG
CTAAACACCC TCGGCGATGC ACTCTGGCCC CCCAAAAGCG CCTGA
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| Protein sequence | MKQTAPQPAG NFGFLAEHDP LFAQIAAAAE QAFYSDPNTT LIKLRQLGEA LAQHLATLSG
ITFDEKTKQV DLLYQLNREL QLEPTVRELF HILRMEGNRA THHFRTQHKE AMDGLKVARS
LAIWFHRSLG KQGADFKAGP FVPPSDPSAQ LRQLQTEIET LKNDLLSASI QLESSQQLQL
LLGKEKAEYE ALALEMDQEA RALAKQAQAH AAELQQLQQD YESRLRTLQA QLTAKNEQQR
NQQKQRAARQ TRQASQKITL TEELTRILID QSLNEAGWQT DSQTLSWVKG ARPEKGVNKA
IAEWPTRHNG EKGRADYVLF YGLTPIAVVE AKRQNENVAG KIPQAERYSK GFQVEPPLTA
AWELEGRSIA WADDTEGHYH IPFVYSCNGR AYLAQLAEQS GTWFRDVREP GNLRRPLPQF
HTPEGLLDLL KRSRQQAEEK LSQEGLSYLR LREYQERAIT AVETTLAQNI RTALLAMATG
TGKTRTIIGL IYRFLKTERF KRILFLVDRT ALGKQATENF KETTLEQNQS LSQIYNIAEL
GDMAPQAETR VQVATVQAMV SRVFASDTPP PIDQYDCIIV DEAHRGYTLD QEMTEGELAT
RDAAQYLSSY RRVLDYFDAV KIALTATPAK HTSDIFGRPV FVYSYREAVA DDWLIDYEPP
IRYLTQLNQH GIHFEKGSQV RAINIDTGEL EIDQLEDDLH FDVDAFNRRV INENFNSVIC
NELVKELDPF GEGKTLIFCA TDKHADMVKR LLDEAFTAIY PDYNQAAVEK ITGKSDKVDT
LISRYKNERY PNIAITVDLL TTGIDVPKIS NLVFMRRVRS RILFEQMIGR ATRRCDNIGK
TVFRVYDPVD IFEALHDANT MKPLVKNPDI TLEQLVRELT DAELLETALA SPGEQAGENQ
ADAVLTHLSQ KLMRVLRKAE KRAETQPQVR QKLDELEQLW GIAPKNLHQH LHHIGPRQAA
GFLRRHSNLT TQLNDVAHLL GSDYRPVISE HHDALLERHQ SYGTHSRPED YLNSFNAFIQ
TQLNQSVALA VVVNKPRDLT REQLKEIRLL LDNAGYSETH LQTAERNQSS QDIAASIIGH
IRRAAIGEPL IPFEQRVDQA MAKIYRLHNW SPVQRNWLQR LAKQLTFEVV LDRPTLNRCF
ATTGGVKGLD KLLDQHLDEV LNTLGDALWP PKSA
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