Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3638 |
Symbol | |
ID | 8117469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4124530 |
End bp | 4126128 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644854012 |
Product | ABC transporter related |
Protein accession | YP_003005925 |
Protein GI | 251791204 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.810983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGACA TGAGCATACC GATGAGAGCG GCGATAATGC CGACGGCGCC GGCAGTCACC ACGACATCGC CGACGGCGCA GACAGAGACC GCGCCGGAGG TGATTATCGA AACCCGCGAC CTGTCGCGCG TCTATCCGGG GGTGACCGCG CTTGATCAGG TCAATTACCG GGTGTATCGC AATCAGGTCA ACGTGCTGAT CGGCGAAAAC GGCGCAGGCA AATCCACCAT GATGAAGATG CTGGCCGGGG TGGAAACGCC GTCGTCCGGG CAGATTCTGC TGGATGGCAA ACCGGTGACG CTGGGCTCGA CCCAACAGGC GGAACGGCAG GGCATCAGCA TCATTTTTCA GGAACTGAAC CTGTTCCCCA ACATGAACGT GATGGACAAC ATCTTCATCG CCAATGAGTT TTTCCAGCGC GGCGTCATCA ACGAAAAATT CCAGTACGCG CTGGCGAAAA CCTTGCTGGA GCGGCTGGAG CTGGACGTTG ATCCCTATAC GCCGCTCGGC GAGCTGGGGA TCGGCCATCA GCAACTGGTG GAGATCGCCC GCGCGTTATC CAAAGACACC CGGGTGCTGA TCATGGACGA GCCGACCTCG GCGCTGAGCC AGTCGGAGGT GAAAGTGTTG TTCGGGGTGA TCGAGCAGCT CAAGCGGCGC GGCGTCACCA TCATTTACAT CTCCCACCGG CTGGAAGAGC TGATGGAGAT TGGCGACCAC ATCACCATTT TCCGCGACGG CCGTTTCATC TGCGAACGTG AAGTGCGCCA CGCCAGCGTG CCCTGGATCA TCGAACAGAT GGTCGGCGAC AAGAAAAAGC ATTTTGACTA CCAGCCTGCG CCGCAGGGCG ACACCGTGTT GACGGTGAGC GGGCTGACGG CGCTGCACCA AAGCGGCGGT TATCGCCTGA ACGACGTCTC TTTTAGCCTG CGCAAAGGCG AAGTGGTGGG GATTTACGGC CTGCTGGGTG CCGGGCGTAC CGAGCTGTTC AAAGGTCTGA TCGGCCTGAT GCCGTGCCAG CAGGGTAGCG TGCAACTCAA CGACGACTGC CTTGACGGGC TGGGGTTTCG CCAGCGACTG GAAAAAGGTA TCGCGCTGGT GCCGGAAGAC CGGCAGGGCG AAGGCATGGT GCAGTTGATG TCTATTCGCG CCAACATGAC GCTCTCTTCG TTGAGCTTGC GCGGCTTCTG GCGCGCCTGG ACGTGGCTGC GTGAACCGGA CGAGGCCCGC CAGGTGGATG AGATGGTGCG CCAACTGGCT ATCAAGGTCA GCGACGACGA ACTGCCGATC ACTTCGCTAT CCGGCGGCAA CCAGCAGAAA GTGGTGCTGG GCAAGGCGCT GATGACCCGG CCGCAGGTGG TACTGCTCGA CGAGCCAACC CGCGGTATCG ACGTCGGCGC CAAAACCGAT GTCTACCACC TGATTGGGCG TATGGCGCAG CAGGGACTCT CGGTGATGTT TTCGTCGTCC GAACTGGATG AAGTGATGGC GCTGGCGGAT CGCATTCTGG TGATGGCTGA CGGCCGCATC ACCGCCGATC TGCCGCGCAG TCAGGTCACC CGCGAAATCC TCATCAGCGC TTCCACCCCT CACGACTAA
|
Protein sequence | MADMSIPMRA AIMPTAPAVT TTSPTAQTET APEVIIETRD LSRVYPGVTA LDQVNYRVYR NQVNVLIGEN GAGKSTMMKM LAGVETPSSG QILLDGKPVT LGSTQQAERQ GISIIFQELN LFPNMNVMDN IFIANEFFQR GVINEKFQYA LAKTLLERLE LDVDPYTPLG ELGIGHQQLV EIARALSKDT RVLIMDEPTS ALSQSEVKVL FGVIEQLKRR GVTIIYISHR LEELMEIGDH ITIFRDGRFI CEREVRHASV PWIIEQMVGD KKKHFDYQPA PQGDTVLTVS GLTALHQSGG YRLNDVSFSL RKGEVVGIYG LLGAGRTELF KGLIGLMPCQ QGSVQLNDDC LDGLGFRQRL EKGIALVPED RQGEGMVQLM SIRANMTLSS LSLRGFWRAW TWLREPDEAR QVDEMVRQLA IKVSDDELPI TSLSGGNQQK VVLGKALMTR PQVVLLDEPT RGIDVGAKTD VYHLIGRMAQ QGLSVMFSSS ELDEVMALAD RILVMADGRI TADLPRSQVT REILISASTP HD
|
| |