| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3630 |
|---|
| Symbol | |
|---|
| ID | 8117461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4116007 |
|---|
| End bp | 4117551 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644854004 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003005917 |
|---|
| Protein GI | 251791196 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTA ATCTGGCAAG ACATATTCGG AAATCTGTTC GGAAATATGC ATTAACCGCA
TTACTGGCAG GTGTTTCTTG CGCCAGCTAT GCCGGCAAAC AAAACGACAC GCTGGTTTAC
GCCTCCGACA GCGAGGTGGA AAACGTCAGC CCGTACCACA ATAACATGCG CGAAGGGGTG
ATTCTGGCGC ATCTCGCCTG GGATACGCTG ATTTATCGCG ATCCGAAAAC CGGAGAATAC
AAAGGCGAGC TGGCGACCGA CTGGCAATGG GAATCGCCCA CGGTATTGCT GCTGCATCTG
CGTAAAGGCG TGACCTTCCA TAATGGCGAT GCCTTTAGCG CCGATGATGT GGTGTACACC
TTCGACAATA TCGCCGGGCC GAATACCGCC TCGGTGATTC CGCAAAGCGT CGATTGGATC
GATAAGGTGG AAAAAGTAGA CGACCATACG GTACGCCTGC ACCTGAAAAA ACCGTTCCCG
GCGGCGCTGG AATATTTATC CGGCCCGACG CCGATCTACC CCGCCCACTA TTTCCAGCAG
GTGAAACTGG AGGGCTTTAG CAAAGCGCCG GTCGGCACCG GGCCGTACAA GATAGTCAAG
GTCACGCCGG GGCAGGGCGT GTCGATGGTG AAAAATCCGG GCTATTTCAA AGACAGCCCG
ATAGGGCAAC CCAAAATCGG CAAGATGCAG TTTGTGGTGA TCCGCGATCC GGAAGCGCGC
GTAGCGCAGT TGATGACCGG CCAGGTGGAC TGGATCTGGC GCGTGGCGTC GGATCAGGTC
GATTCGCTGT CGGCGATGCC GAATATCGCG GTAAAAAGCG GCGAAACCAT GCGTGTCGGT
TTTCTGCAAC TGAACATCAA TGCCGGCGGT GCGGAAGGCG CGCCGCTCAA AGACTTGCGT
GTGCGTCAGG CCATCAACTA TGCCGTTAAC CGTCAGGCGA TGGTGGATAA CCTGGTGCGC
GGCGGCAGTA AGCCGGTCTA TTCCGCCTGT TTCCGTACCC AGACCGCCTG CGATACCCGC
CAGGTGATCT CCTATCCCTA CGACCCGGCC AAAGCCAAGC AACTGCTGGC GGAGGCGGGT
TACCCCAACG GCTTCGACAC CGACTTGTGG GCCTACCGCG AGCGCGATTA CGCCGAGGCT
GTTATTGGCG ATTTGCGCAA AGTCGGTATC CGTGCGCGGC TGCATTTCGT GCAGTACCCG
GTGATGGCGA GTGCGCTGGC GTCCGGTCAG GCGCCGATGT CGTTCAGCAC CTGGGGGTCT
TTCTCCATCA ATGACGCCAC CGCGTTCGTT ACCCCCTATT TCGGCGGCAA AGGCAGCGAT
ATCTGGAAAG ATCCTCAGGT GATCGCCGAA CTGGCGCAGG CCGATGCGGT GGTAGACCCG
CAACAGCGCC GTGCGCTGTA CGCTACGCTG TTGGGGCACA TTTCCGCTCA GGCTTATATG
GCACCGCTGT TCTCCTATTC CACCCATTAT GCCTTTACTG CCGACCTGAA TTTTCAGGAC
TGGCCGGACG AACTGCCGCG CTTCGCCGAA GCGAGCTGGA AGTAA
|
|---|
| Protein sequence | MARNLARHIR KSVRKYALTA LLAGVSCASY AGKQNDTLVY ASDSEVENVS PYHNNMREGV
ILAHLAWDTL IYRDPKTGEY KGELATDWQW ESPTVLLLHL RKGVTFHNGD AFSADDVVYT
FDNIAGPNTA SVIPQSVDWI DKVEKVDDHT VRLHLKKPFP AALEYLSGPT PIYPAHYFQQ
VKLEGFSKAP VGTGPYKIVK VTPGQGVSMV KNPGYFKDSP IGQPKIGKMQ FVVIRDPEAR
VAQLMTGQVD WIWRVASDQV DSLSAMPNIA VKSGETMRVG FLQLNINAGG AEGAPLKDLR
VRQAINYAVN RQAMVDNLVR GGSKPVYSAC FRTQTACDTR QVISYPYDPA KAKQLLAEAG
YPNGFDTDLW AYRERDYAEA VIGDLRKVGI RARLHFVQYP VMASALASGQ APMSFSTWGS
FSINDATAFV TPYFGGKGSD IWKDPQVIAE LAQADAVVDP QQRRALYATL LGHISAQAYM
APLFSYSTHY AFTADLNFQD WPDELPRFAE ASWK
|
|---|
| |