Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3629 |
Symbol | |
ID | 8117460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4115044 |
End bp | 4115961 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644854003 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003005916 |
Protein GI | 251791195 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGAAGT ACGTTTTTCA GCGGTTACTG GTGGCGCTGG CGGTGTTGTT TACCGTGGCG GCAGTCAGCT TTTCGCTGCT GCACCTGTCC GGCGACCTAG CGACCGCCAT CGCCGGGCCG GACGCCACCG TCGAAACCAT CGCCCAGATC CGGGTACAAA ACGGGTTGGA TCAGCCGCTA TTGAGCCAGT TCTCCCGTTG GATGTGGTCG GCGCTGCAAC TGGATTTCGG GCGCTCGTTC TATTTTGAAA ATACGGTGAT GGAGCTGGTC GGCCAGCGTA TGCCGGTCAC CCTGAAGCTG GGCGGGGCGG CGCTGTTGCT GGCGCTGGTG GTGGCGATCC CCCTCGGTGT GCTGGCGGCG GTATTTCGGG ATACCTGGGT CGATCGTTTT GCCATGTTGG TGTCGGTTAT CGGTCAGGCG ATGCCCAATT TCTGGTTTGC GCTGGTGTTG ATCCTGGTGT TCGCCGTTGG GCTGAAGTGG CTGCCGGTGG CGGGTAACGC CGACTGGCAA CACTTCGTAC TGCCGGCGGT GGCGCTGGGG TATTACGCCA TGCCGTCGCT GATGCGGCTA ACCCGCTCCG GCATGTTGGA CGTGCTCGGC TCCGACTATA TCCGCACCGC GCACGCCAAA GGGCTGAGTG CGTTCAAGGT GGTGGTCAAG CACGGCCTGC GCAACGCCAT CATTCCGGTA GTCGCGCTGG CGACGGTGGA ACTGGGGTTC ATGCTCGGCG GTTCGGTGGT GATCGAATCG GTGTTTTCGT TGCAGGGGCT GGGACAGTTG GCGTGGGATT CCATCGCCCG TAACGACTTT CCGGTGGTGC AGGCCATCGT GCTGATCATC GCCGTGTTTT ATATCGGGCT GACGTTCCTG GCGGATGTGC TCAACGCGCT ATTAGACCCA CGACTGCGCA GCAGATAA
|
Protein sequence | MVKYVFQRLL VALAVLFTVA AVSFSLLHLS GDLATAIAGP DATVETIAQI RVQNGLDQPL LSQFSRWMWS ALQLDFGRSF YFENTVMELV GQRMPVTLKL GGAALLLALV VAIPLGVLAA VFRDTWVDRF AMLVSVIGQA MPNFWFALVL ILVFAVGLKW LPVAGNADWQ HFVLPAVALG YYAMPSLMRL TRSGMLDVLG SDYIRTAHAK GLSAFKVVVK HGLRNAIIPV VALATVELGF MLGGSVVIES VFSLQGLGQL AWDSIARNDF PVVQAIVLII AVFYIGLTFL ADVLNALLDP RLRSR
|
| |