Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3498 |
Symbol | |
ID | 8117967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3974915 |
End bp | 3976186 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644853874 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_003005788 |
Protein GI | 251791067 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.16674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGCAC CACCGAATGG AGAAAGTCCG TCGTCAACAG CATGGCTGAT GGAAGCCATC TGTGAACCAG TCAATCTCAG GCAAGCCCTG AAGCGGGTAA AGGCCAACAA AGGCGCGTCA GGTGTAGAGG GTATGAGCGT AAGCGAATTG CCGGACTATC TGAAGCATCA CTGGCCGGAA CTGAAAGCGC AACTGCTGTC CGGCAGCTAC TGCCCATCGC CAGTGAGAAG AGTGACCATC CCGAAACCCG GTGGCGGCGA ACGCCTGCTG GGTATTCCGA CGGTGGTGGA TCGTTTTGTC CAGCAGGCGA CGATGCAGGT GTTGCAGAGG CAATGGGATG CGTCGTTCAG CGACAGCAGC TACGGGTTCC GCCCCGGCCG TTCGGCCCAT CAGGCAGTGA AACAGGCTCA GGGCTATATC GGTTCAGGGC ATCACTGGGT AGTTGACCTT GATCTGGAGA AGTTCTTCGA CAGGGTGAAC CACGATGTGC TGATGAGTCG GGTTGCAAAA CGGGTGTCGG ACAAACGGGT GCTGTCACTT ATCCGTGGGT TCCTGAATGC AGGCGTGATG GAAGCAGGGC TGGTAAGTCC GGTGACGGAA GGGATGCCGC AGGGCGGCCC TCTGTCGCCG CTGTTATCAA ATCTGTTGCT GGACGACTTC GATAAGGAAC TGGAGAAACG AGGCCTGAAG TTCGCCCGTT ACGCAGACGA CTGCAACATC TATGTGAAAA GCGAGCGTGC AGGCAACCGA GTGATGGAGG GGCTGACGCA CTGGCTGAGC CGGAAGCTGA AGCTGAAGGT CAACGCGAAG AAGAGCGCGG TAGCGCATCC GGCTATGCGT AAGTTCCTGG GTTACAGCTT CAGGGTAGGC AGGAAGGTAT GGTGCGTGGT GTCGCCGGAA TCGGTAAAGC GGTTTAAAAC GCGGGTAAGG GAACTGACGG GGCGCAACAC GGGAAGAAGC CTCGAGCAGC TAATCCAGCC GTTAAAGCGA TACCTGACGG GCTGGAAAAG CTACTATGGT CTGAACGAGT GGCCGTCGCT GATGCGACCG CTCAACATGT GGATAAGGCG TAGGCTGCGA AGTGTGCTGT GGAAACAGTG GAAAACGGGC GGCAAGCGTT TTAACGCGCT GCGAGCGAGG GGAATAAGTA AAGACCTAGC AGCGCAGACG GTAGGAAGCT GTCATAAACA GTGGCGGATA AGTTGCAGCC CGGCGCTGAA TATGTCGCTA CCGAATAGTC TGTTCCGAGG ACTGGGCCTG CCGGAGTTAT AG
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Protein sequence | MQAPPNGESP SSTAWLMEAI CEPVNLRQAL KRVKANKGAS GVEGMSVSEL PDYLKHHWPE LKAQLLSGSY CPSPVRRVTI PKPGGGERLL GIPTVVDRFV QQATMQVLQR QWDASFSDSS YGFRPGRSAH QAVKQAQGYI GSGHHWVVDL DLEKFFDRVN HDVLMSRVAK RVSDKRVLSL IRGFLNAGVM EAGLVSPVTE GMPQGGPLSP LLSNLLLDDF DKELEKRGLK FARYADDCNI YVKSERAGNR VMEGLTHWLS RKLKLKVNAK KSAVAHPAMR KFLGYSFRVG RKVWCVVSPE SVKRFKTRVR ELTGRNTGRS LEQLIQPLKR YLTGWKSYYG LNEWPSLMRP LNMWIRRRLR SVLWKQWKTG GKRFNALRAR GISKDLAAQT VGSCHKQWRI SCSPALNMSL PNSLFRGLGL PEL
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