| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3484 |
|---|
| Symbol | |
|---|
| ID | 8117952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3955784 |
|---|
| End bp | 3956725 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644853859 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_003005774 |
|---|
| Protein GI | 251791053 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000124556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG CAGTTCTCGG AGCCGCAGGT GGTATTGGTC AAGCCCTTGC TCTTCTCCTC
AAAACCCAGC TTCCTTCAGG TTCAGAGCTC TCTCTTTATG ATATCGCTCC CGTTACACCG
GGTGTAGCTG TCGACTTGAG CCACATTCCT ACCGACGTGA AAATCAAAGG TTTTAGTGGC
GAAGATGCAA CTCCAGCTCT GGAAGGTGCG GATATTGTGT TGATGTCTGC CGGTGTTGCC
CGTAAGCCGG GTATGGACCG TTCCGATTTG TTTAACGTTA ACGCAGGCAT TGTGCGTAAT
CTGGTTTCTC AGATTGCCAG TACCTGTCCT AAAGCTTGTA TCGGTATTAT CACCAACCCG
GTCAATACCA CGGTAGCGAT TGCCGCCGAA GTGCTGAAAC AGGCTGGGGT CTATGACAAA
AACAAATTGT TTGGCGTGAC GACGCTGGAC ATTATCCGCT CGAATACCTT TGTTGCTGAA
CTGAAAGGTA AGCAGCCGCA GGAGATCGAA GTGCCGGTTA TCGGCGGCCA CTCTGGCGTT
ACTATTCTGC CGTTGTTGTC CCGGATTCCG GGTGTGAGCT TCACTGAACA AGAAGTCGCA
GACCTTACCA AACGTATTCA AAACGCAGGT ACTGAGGTTG TGGAGGCGAA AGCCGGTGGC
GGGTCAGCAA CCCTTTCCAT GGGGCAGGCG GCCGCACGTT TTGGCTTGTC GCTGGTTCGT
GCTCTGCAGG GCGAAAGCGG TGTGGTTGAG TGTGCTTATG TCGAAGGCGA TGGTAAACAT
GCCCGCTTCT TTGCACAGCC GCTGCTGCTG GGGAAAAACG GTATCGCCGA GCATAAAGAT
ATTGGTGCGT TGAGCGCGTT TGAACAGCAG GCTCTGGTGA GCATGTTGGA TACCCTGAAA
CAGGATATTG CGCTGGGCGA AGAGTTCGTT AACAAGAAAT AA
|
|---|
| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPSGSEL SLYDIAPVTP GVAVDLSHIP TDVKIKGFSG
EDATPALEGA DIVLMSAGVA RKPGMDRSDL FNVNAGIVRN LVSQIASTCP KACIGIITNP
VNTTVAIAAE VLKQAGVYDK NKLFGVTTLD IIRSNTFVAE LKGKQPQEIE VPVIGGHSGV
TILPLLSRIP GVSFTEQEVA DLTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR
ALQGESGVVE CAYVEGDGKH ARFFAQPLLL GKNGIAEHKD IGALSAFEQQ ALVSMLDTLK
QDIALGEEFV NKK
|
|---|
| |