| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3458 |
|---|
| Symbol | |
|---|
| ID | 8117924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3927998 |
|---|
| End bp | 3929017 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644853832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003005749 |
|---|
| Protein GI | 251791028 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.147347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTA CCATTCCTTT CTCGCTGCTC GATCTGGCCC CTATCCCGCA GGGCAACACG
GCCCGCGATG CGTTCCATCA TTCTCTGGAT CTGGCGCAAC ATGCGGAAAA ATGGGGATAT
CAGCGCTACT GGCTGGCAGA ACACCACAAC ATGACCGGCA TCGCCAGCGC GGCCACCTCG
GTATTGATCG GTTACCTTGC CGCAGGAACG CAGCATATCC GGCTTGGCTC CGGCGGCGTG
ATGCTGCCAA ATCATGCGCC GCTGGTGATT GCCGAACAGT TCGGGACTCT CGAATCGCTC
TATCCCGGCC GTATCGAGCT GGGACTGGGG CGCGCACCCG GCACCGACCA ACGCACCATG
CAGGCATTAC GCCGCCACCT GAATGCCGAT ATCGACGATT TTCCCCACGA CGTGCAGGAG
CTTCAACGCT ACTTCGCCCC AGCTCAGCCG GGTCAGCCCG TGCAGGCAGT ACCGGGACAG
GGGTTGAATG TCCCAATTTG GCTGTTAGGT TCCAGCTTGT ACAGCGCGCA GTTAGCGGCT
TCAATGGGGC TACCGTTTGC CTTCGCCGCC CATTTCGCAC CGGATATGCT GTTGCAGGCT
TTGCAGCTTT ATCGCGACAA TTTCCGGCCA TCCGCTCAAC TGGAGAAACC GTACGCCATG
GTGTGCGTCA ATGTCGTCGC CGCCGACAGC GATCGTGACG CCCGTTTCCT GTTTACTTCG
CTACAGCAGC AGTTTATCAA CCTGCGGCGT GGTACGCCGG GGCCGCTGCC GGCACCGGTG
GAATCGATGG AGACGTACTG GTCAGCCGCG GAGCAGTTTG CCGTGGAACA GACATTGCGG
CTGGCTATCG TAGGTGATAC GGCCAAAGTG CGCCACGGCC TGCAAACCTT ACTGCGGGAA
ACCCAGGCGG ACGAGCTGAT GATCAACGGC CAGATATTCG ACCATCAGGC ACGGCTGCGT
TCGTTTGAGC TGGTAGCGCA ACTGCAAGCG GAAATCGTGC GGGAAGCGCG TATTCAGTAA
|
|---|
| Protein sequence | MTATIPFSLL DLAPIPQGNT ARDAFHHSLD LAQHAEKWGY QRYWLAEHHN MTGIASAATS
VLIGYLAAGT QHIRLGSGGV MLPNHAPLVI AEQFGTLESL YPGRIELGLG RAPGTDQRTM
QALRRHLNAD IDDFPHDVQE LQRYFAPAQP GQPVQAVPGQ GLNVPIWLLG SSLYSAQLAA
SMGLPFAFAA HFAPDMLLQA LQLYRDNFRP SAQLEKPYAM VCVNVVAADS DRDARFLFTS
LQQQFINLRR GTPGPLPAPV ESMETYWSAA EQFAVEQTLR LAIVGDTAKV RHGLQTLLRE
TQADELMING QIFDHQARLR SFELVAQLQA EIVREARIQ
|
|---|
| |