Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3455 |
Symbol | |
ID | 8117921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3925143 |
End bp | 3925667 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644853829 |
Product | Sterol-binding domain protein |
Protein accession | YP_003005746 |
Protein GI | 251791025 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.330652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGAAA AACTACGGGC GCAGATTGTG CGTCAGGGGC CGCGTTTACT GAGTAAGCCG TTAACGTTAA CGCCTTTCTT CCTGCAACGC CGGGTGTTGG AGCAATTGCT GGGATGGCAG TTCCGTCAGG CGTTGGAAGA AGGTGAACTG GATTTTCTTG ACGGGCGTTG GTTGCGAATC GAAGTGCGGG ATATCGGTTT GCAGTGGTTT GTTACGCTGC GTGATAACCG GCTGGAGATC GGCCATAACG AGCTGGCGGA CGTCAGTTTC AGCGCCGATG CCAACGATCT GATTTTGATC GCCGCCCGTC GTGAAGATCC GGACACGCTG TTTTTCCAGC GTCGCCTGCG CATTGAAGGC GATACCGAAC TGGGGCTGTA CGTTAAAAAC CTGATGGATG CCATCGAGCT GGAAAATATG CCGGCGCCGT TGCGGGTTGC GTTGCTGCAA CTGGCCGGAT TCGTGGCCGC CGGTTTACAG GAGGGCGCGG AGCAGGCCAG CCCGCACGCG CCAGTATCAT GTTGA
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Protein sequence | MLEKLRAQIV RQGPRLLSKP LTLTPFFLQR RVLEQLLGWQ FRQALEEGEL DFLDGRWLRI EVRDIGLQWF VTLRDNRLEI GHNELADVSF SADANDLILI AARREDPDTL FFQRRLRIEG DTELGLYVKN LMDAIELENM PAPLRVALLQ LAGFVAAGLQ EGAEQASPHA PVSC
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