| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3392 |
|---|
| Symbol | |
|---|
| ID | 8119928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3860793 |
|---|
| End bp | 3861776 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644853766 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003005687 |
|---|
| Protein GI | 251790966 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAG GTGCACGATT GTCCGTGTCG CTCGCTGAAG CTGGATTAAG TGAGCGGACG
TGGCGACGCT GGCAAACGTC GTGGGAGGAC AAGCGTGTCA GCGCGGTCAG GCCCTCCCCG
GTGAACCAGT TAAGTGAACA GGAAGAGCAA CAGATACTGG CAGTGTGCCA TCAGCCAGAC
TACGCCAGCC TCCCCCCGTC ACAAATCGTA CCGGCGTTGG CGGATAAGGG GATTTATCTG
GCAAGCGAGT CAACCTTTTA CCGGGTACTG CGTCGTCATG GAGAGGTGCA TCGCCGGGGA
CGGCAACGGG CAGCGCAGAA AGTCACCCCG GCTACGAGTT GGCAGGCCAG CGGGCCGAAT
GAGGTGTGGA CATGGGACAT TACCTGGCTG CCGTCGACGG TAAAGGGGCG CTGGTTTTAC
CTGTATCTGG TGGAAGACCT CTACAGCCGA AAAATCGTGG GATATGAAGT GCATGAAACT
GAAAGTGGTG AGCAGGCGGC AGCCCTGATA CAACGCACGG TCCTTCGGGA AGGATGCTGG
CAAAACCCGC CAGTACTTCA TGCGGACAAC GGCGCGGCGA TGAAATCACA GACGTTGCAA
ATGAAGCTAC ACGAGCTGGC GATAACACCC TCTCACAGCC GGCCGAGGGT GAGTAACGAT
AATGCGTATG TGGAGTCGCT GTTCCGGACA CTGAAATATG TCCCGCAGTG GCCGTCATCG
GGGTTCGATA CATTGGATGA GGCGCGTGAA TGGGTAGAGG ATTTTACGCA GTGGTATAAC
GAAATGCACA GGCATAGCGG CATCAGGTAT GTGACGCCGG GTCAGCGACA TCGTGGAGAA
GACGGCGTGC TGTTGAAAAA TCGGGATGAG GTGTACAAAA AGGCAAAAGC GCAACGGCCT
GAACGCTGGT CTGGCAGAAC ACGAAACTGG CATCAGGCAG GCAAGGTAAT GCTGAATCCA
GAACGGGAAA AACAGGCAGC CTAA
|
|---|
| Protein sequence | MASGARLSVS LAEAGLSERT WRRWQTSWED KRVSAVRPSP VNQLSEQEEQ QILAVCHQPD
YASLPPSQIV PALADKGIYL ASESTFYRVL RRHGEVHRRG RQRAAQKVTP ATSWQASGPN
EVWTWDITWL PSTVKGRWFY LYLVEDLYSR KIVGYEVHET ESGEQAAALI QRTVLREGCW
QNPPVLHADN GAAMKSQTLQ MKLHELAITP SHSRPRVSND NAYVESLFRT LKYVPQWPSS
GFDTLDEARE WVEDFTQWYN EMHRHSGIRY VTPGQRHRGE DGVLLKNRDE VYKKAKAQRP
ERWSGRTRNW HQAGKVMLNP EREKQAA
|
|---|
| |