Gene Dd1591_3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3385 
Symbol 
ID8119921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3853377 
End bp3854462 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID644853759 
ProductABC transporter related 
Protein accessionYP_003005680 
Protein GI251790959 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACGT TACGACTGCA CAACGTCAGC AAGCAATTTG ACGATAAACC GGCGCTGCGC 
TCGCTGTCGC TGGAGATTGC CGACGGCGAA TTTCTGGTAC TGGTCGGGCC GTCCGGCTGT
GGCAAAAGCA CCCTATTACG CCTGCTGGCC GGGCTGGAAG CAGTCAGCGA CGGCGAAATT
TGGCTGGATG GCGCCAACAT CACCGCTCAG TCGCCGCGGG ATCGAAACTT CGCGATGATC
TTTCAGAACT ACGCGCTGTT TCCCCACCTC ACGGTGAAGG ACAACATCAC CTTCGGTATG
CAAATTCGCC ATGAACCGAA AGCAAGTTGG CAGCCCCGGC TGGAAAAAGT GGCGCAATTG
CTGCAACTGG ATACATTGTT GGATCGCAAA CCGGGCAAGC TGTCCGGCGG CCAGCGCCAG
CGGGTGGCAA TGGCGCGCGC CATCGTGCGT GACCCGAAAC TGTTTTTGAT GGACGAGCCG
CTGTCCAATC TGGATGCCCG GCTACGCACC GAAGTGCGCG ACGGCATTAT GACATTGCAT
CAGCAACTCA AGACCAGCAC CGTTTACGTC ACCCACGACC AGATAGAAGC CATGTCGATG
GCGGATCGCA TCGTGGTGAT GAACCACGGC GAGGTCCAGC AAGTCGGTAC GCCGGAGCAA
CTGTACGCGT TCCCGGGCAA CCTGTTTGTC GCCAGCTTCA TCGGCTCGCC GGCCATGAAC
ATTATCACCT TGCCTTGCCG CGCCGGTATG GTGCAGGTCG GCGAAAACAC GCTCCCTCTG
CCGCCACACG CCACGCATCT TCAGGCGGTC TTTTTCGGTA TTCGCCCGGA ACACCTCACC
GATACCCCCG AGGCAGAACA ACATACACAT CACCTGTCCG GCATCGTGAC GCAACGAGAA
TTGATGGGCG CAGACTATCT GCTGCACATC AGCACGCCCA TCGGCGAACT ACGCTACAGC
CGCAAAAATC GCGGCGATAT CCCGATGGTG GGCGACACCG TCAACCTCGG CTTTTCACCT
TTTGATGTTC ATCTTTTTCA TGCTGAAACA CAGCAGAATC TATACCAGGA GACTTCCTAT
GCATAA
 
Protein sequence
MATLRLHNVS KQFDDKPALR SLSLEIADGE FLVLVGPSGC GKSTLLRLLA GLEAVSDGEI 
WLDGANITAQ SPRDRNFAMI FQNYALFPHL TVKDNITFGM QIRHEPKASW QPRLEKVAQL
LQLDTLLDRK PGKLSGGQRQ RVAMARAIVR DPKLFLMDEP LSNLDARLRT EVRDGIMTLH
QQLKTSTVYV THDQIEAMSM ADRIVVMNHG EVQQVGTPEQ LYAFPGNLFV ASFIGSPAMN
IITLPCRAGM VQVGENTLPL PPHATHLQAV FFGIRPEHLT DTPEAEQHTH HLSGIVTQRE
LMGADYLLHI STPIGELRYS RKNRGDIPMV GDTVNLGFSP FDVHLFHAET QQNLYQETSY
A