| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3377 |
|---|
| Symbol | actP |
|---|
| ID | 8119913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3843156 |
|---|
| End bp | 3844814 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644853751 |
|---|
| Product | acetate permease |
|---|
| Protein accession | YP_003005672 |
|---|
| Protein GI | 251790951 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR02711] cation/acetate symporter ActP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0784287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCC GCATTTTCCT GCTGACCGGT CTGCTGGGGC TACCGATATG GGCGCAAGCG
GCGGATGCCG TTTCCGGCAA CGTCCAAAAG CAACCGCTGA ATATTCAGGC TATTGTGTTG
TTTGTGTTAT TTGTGGCGGC AACCCTCTAT ATCACCTATT GGGCTTCCAA ACGTACCCGT
TCGCGCAGTG ATTACTATAC TGCGGGTGGT AACATCACCG GCTTTCAGAA CGGGCTGGCG
ATCGCCGGTG ACTATATGTC CGCGGCCTCG TTCCTCGGCA TTTCAGCGCT GGTGTACACG
TCCGGCTTTG ACGGCCTGAT CTACTCGCTC GGCTTTCTGG TGGGCTGGCC GATCATCCTG
TTCCTGATCG CCGAACGACT GCGCAATCTG GGTCGTTATA CCTTCGCCGA CGTGGCTTCC
TACCGGTTGC AGCAAAAGCC GATCCGCACC CTGTCCGCCT GCGGCTCTCT GGTGGTGGTG
GCACTGTACC TGATTGCGCA GATGGTGGGC GCAGGTAAAC TCATCCAGTT GCTGTTCGGG
CTGAACTACC ATATCGCGGT GGTGCTGGTC GGCATCCTGA TGGTGATGTA CGTGCTGTTC
GGCGGTATGC TGGCGACCAC CTGGGTGCAA ATCATCAAAG CGGTATTGCT GCTGTGCGGC
GCCACCTTTA TGGCGATCAT GGTGCTGAAA ACGGTCAACT TCAGCTTTGA CAGCCTGTTC
ACCGAGGCCA TCAAGGTTCA CGCAAAAGGC ATTGCCATCA TGAAACCCGG CGGGCTGGTA
TCCGACCCGA TCTCCGCGTT GTCTCTTGGG CTGGGGCTGA TGTTCGGCAC CGCTGGCCTG
CCGCACATCC TGATGCGCTT CTTCACCGTC AGCGATGCCA AAGAAGCGCG TAAAAGCGTG
CTCTTCGCCA CCGGTTTCAT GGGGTATTTC TACTTCCTGA CGTTCATTAT CGGCTTCGGT
GCGATCCTAT TGGTCGGCGC TAACCCGGCA TTTAAAGATG CCACCGGCGC ACTGATCGGC
GGTAATAATA TGGCGGCGGT GCACCTTTCC AATGCGGTAG GCGGCAACTT CTTCCTGGGC
TTTATCTCCG CGGTCGCTTT CGCTACCATT CTGGCGGTAG TCGCCGGGTT GACGCTGGCC
GGCGCATCCG CAGTATCCCA TGACCTGTAC TCGAATGTGA TCAAGAAAGG CCAGGCCACC
GAGCGCGACG AACTGAGAGT ATCGAAACTC ACGGTGCTAG TGTTGGGTGT GATCGCCATC
CTGCTGGGGA TTTTGTTCGA AAATCAGAAC ATCGCCTTCA TGGTGGGGCT GGCATTCTCG
ATTGCCGCCA GCTGTAACTT CCCGATTATC CTGTTGTCGA TGTACTGGTC GAAGTTGACC
ACCCGCGGTG CGATGATCGG CGGTTGGGCC GGGCTGTTAA CGGCCGTTAT CCTGATGATT
CTTGGGCCGA CCATTTGGGT GAAAATTCTC GGTCATGCGA CCCCAATCTA TCCGTATGAA
TATCCGGCGC TGTTCTCGAT GCTGGTGGCT TTTGTCGGTA TCTGGTTTTT CTCGATTACC
GATAATTCCG CTAATGCAGT CGAAGAACGC AGCAAGTTCA AGGCGCAGTT CATCCGTTCA
CAAACCGGCC TGGGTATCTC AAAAGGTTCC TCTCACTAA
|
|---|
| Protein sequence | MKSRIFLLTG LLGLPIWAQA ADAVSGNVQK QPLNIQAIVL FVLFVAATLY ITYWASKRTR
SRSDYYTAGG NITGFQNGLA IAGDYMSAAS FLGISALVYT SGFDGLIYSL GFLVGWPIIL
FLIAERLRNL GRYTFADVAS YRLQQKPIRT LSACGSLVVV ALYLIAQMVG AGKLIQLLFG
LNYHIAVVLV GILMVMYVLF GGMLATTWVQ IIKAVLLLCG ATFMAIMVLK TVNFSFDSLF
TEAIKVHAKG IAIMKPGGLV SDPISALSLG LGLMFGTAGL PHILMRFFTV SDAKEARKSV
LFATGFMGYF YFLTFIIGFG AILLVGANPA FKDATGALIG GNNMAAVHLS NAVGGNFFLG
FISAVAFATI LAVVAGLTLA GASAVSHDLY SNVIKKGQAT ERDELRVSKL TVLVLGVIAI
LLGILFENQN IAFMVGLAFS IAASCNFPII LLSMYWSKLT TRGAMIGGWA GLLTAVILMI
LGPTIWVKIL GHATPIYPYE YPALFSMLVA FVGIWFFSIT DNSANAVEER SKFKAQFIRS
QTGLGISKGS SH
|
|---|
| |