Gene Dd1591_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3362 
Symbol 
ID8119098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3823952 
End bp3825571 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content61% 
IMG OID644853736 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003005657 
Protein GI251790936 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGA TTGAAGCCCA GGCCGCACGT TTCGGCTATC GCTATCGCTG GCTGGCGACC 
GTCACCATCA TGCTCGGCAC CATCGCCACC ACCGCCACGG CGACCATCGT CAATGTGGCG
ATGCGTGACA TCATGGGCGC ATTCGGTATG GGGCAGGATC AGGCGCAATG GTTATCCACC
GCCTTTCTGG CTTCGATGAC CGCAACCATG CTGATCACCG CCTGGACACT GGAGCGCTTT
GGTTACCGCG CCACCTATGT CGGCTCGCTG GCGGTGTTCA TCGCCGGTAG CCTGCTCGGC
ACCTTCAGCC AGAACAGCAC CGAGGTGATC ATTGCACGAA TTCTCCAGGG TGGCGCCAGC
GGCGTGATCC AGCCACTGGC GATGATCATC ATCTCGCAGG TATTTCCCGT GTCGGAACGC
GGTAAAGCGA TGGGGATTTA CGGCGTCGGC GTGGTTCTGG CGCCGGCACT GGGGCCGGCT
GCCGGCGGAT TAATGGTCGA CCAGCTCGAC TGGCGCGCCG TGTTCATGGT GGTGGTGCCG
TTTTGTCTGG CCGGGATCGC CGCCGCATGG GTTATTCTGC CGGGCAAAAG CGCGCAAACC
GGCGGTTCGC CGCGCCGCTT CGATACCATA GGGTTCATTC TGCTGGTCAC GGCGTTAACC
TCGCTGCTGG CCGGGCTATC CAATGGGCAG CGTGAAGGCT GGGGATCATT TTTTATTCTC
TGCCTGCTGA CTACCGCGGT AATCTCAACA CTGGCGTTTA TCATCCGCGA GTTCACCACA
CCGTATCCGC TGCTGAGTCT GCGGGTATTC GCCAACCCGG CGTTTACCTC CGGCTGCATC
GTGGCATTCG CTCTGGGAGC GGGCATCTAC GGTTCAACCT ATATCATCCC GTTGTTTGTA
CAAAGTATTC AGGGCTACAC GCCGACGCGC TCCGGCTTGC TGCTGATGCC GGCCGGACTG
GCGCTCGGCA TGGTGTTCCC ACTGGCGGGG GCGCTCAGCG ACAAGCTCAA ACCGCACCTG
CTGGTGATAG CAGGTTTACT GCTGTTCGGG CTATCTTGCT GGCTGTCCAG CGCGGCGGAT
ACCGACACCC CCTTCTGGAC CATGGCCTGG TGGATAGTCA TCGGCCGCGT TGGGCTTGGG
GTGATGTTGC CCGCCATGAA TGCCGGCGCG CTACGGGCGT TGCCGCCGGC ACAATTGGCG
CAAGGCGCAG GGAGCCTGAA TTTTATTCGT CAGTTGGGCG GCGCCATGGG CGTCAACCTG
CTGTCGGTTT TTATTGAACG ACGCGCGACG TTTCACGGCC AAATGCTGGC ACAATCGCTG
ACGCTGGACA ATATTCGCAG CACCGACGCC ATCCGCCAGC TTGGCCTGCT GTTTAGCCAC
GGCGGCAATC CGCTCGGCGA GCCGCTGAGC ACCCGCATCA ACCCCGGCAT CATGACCTAT
CTGGAATCGG TGTTAACCCC CAAAGCACAG ATGTTTGCCT ATCTGGATGG CTTTTTTATG
GTGGCGATGT TCTTTTTTCT GGCGATCTTA CCCGCCTGGT TTATCCGGCC GCGCCCGGTG
CTGAACCCTA CGCCGTCATC GGCAGCCATC GCCGTGGATA ACGCCAAAGC CCCAACATGA
 
Protein sequence
MSPIEAQAAR FGYRYRWLAT VTIMLGTIAT TATATIVNVA MRDIMGAFGM GQDQAQWLST 
AFLASMTATM LITAWTLERF GYRATYVGSL AVFIAGSLLG TFSQNSTEVI IARILQGGAS
GVIQPLAMII ISQVFPVSER GKAMGIYGVG VVLAPALGPA AGGLMVDQLD WRAVFMVVVP
FCLAGIAAAW VILPGKSAQT GGSPRRFDTI GFILLVTALT SLLAGLSNGQ REGWGSFFIL
CLLTTAVIST LAFIIREFTT PYPLLSLRVF ANPAFTSGCI VAFALGAGIY GSTYIIPLFV
QSIQGYTPTR SGLLLMPAGL ALGMVFPLAG ALSDKLKPHL LVIAGLLLFG LSCWLSSAAD
TDTPFWTMAW WIVIGRVGLG VMLPAMNAGA LRALPPAQLA QGAGSLNFIR QLGGAMGVNL
LSVFIERRAT FHGQMLAQSL TLDNIRSTDA IRQLGLLFSH GGNPLGEPLS TRINPGIMTY
LESVLTPKAQ MFAYLDGFFM VAMFFFLAIL PAWFIRPRPV LNPTPSSAAI AVDNAKAPT