Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3362 |
Symbol | |
ID | 8119098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3823952 |
End bp | 3825571 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644853736 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003005657 |
Protein GI | 251790936 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCCGA TTGAAGCCCA GGCCGCACGT TTCGGCTATC GCTATCGCTG GCTGGCGACC GTCACCATCA TGCTCGGCAC CATCGCCACC ACCGCCACGG CGACCATCGT CAATGTGGCG ATGCGTGACA TCATGGGCGC ATTCGGTATG GGGCAGGATC AGGCGCAATG GTTATCCACC GCCTTTCTGG CTTCGATGAC CGCAACCATG CTGATCACCG CCTGGACACT GGAGCGCTTT GGTTACCGCG CCACCTATGT CGGCTCGCTG GCGGTGTTCA TCGCCGGTAG CCTGCTCGGC ACCTTCAGCC AGAACAGCAC CGAGGTGATC ATTGCACGAA TTCTCCAGGG TGGCGCCAGC GGCGTGATCC AGCCACTGGC GATGATCATC ATCTCGCAGG TATTTCCCGT GTCGGAACGC GGTAAAGCGA TGGGGATTTA CGGCGTCGGC GTGGTTCTGG CGCCGGCACT GGGGCCGGCT GCCGGCGGAT TAATGGTCGA CCAGCTCGAC TGGCGCGCCG TGTTCATGGT GGTGGTGCCG TTTTGTCTGG CCGGGATCGC CGCCGCATGG GTTATTCTGC CGGGCAAAAG CGCGCAAACC GGCGGTTCGC CGCGCCGCTT CGATACCATA GGGTTCATTC TGCTGGTCAC GGCGTTAACC TCGCTGCTGG CCGGGCTATC CAATGGGCAG CGTGAAGGCT GGGGATCATT TTTTATTCTC TGCCTGCTGA CTACCGCGGT AATCTCAACA CTGGCGTTTA TCATCCGCGA GTTCACCACA CCGTATCCGC TGCTGAGTCT GCGGGTATTC GCCAACCCGG CGTTTACCTC CGGCTGCATC GTGGCATTCG CTCTGGGAGC GGGCATCTAC GGTTCAACCT ATATCATCCC GTTGTTTGTA CAAAGTATTC AGGGCTACAC GCCGACGCGC TCCGGCTTGC TGCTGATGCC GGCCGGACTG GCGCTCGGCA TGGTGTTCCC ACTGGCGGGG GCGCTCAGCG ACAAGCTCAA ACCGCACCTG CTGGTGATAG CAGGTTTACT GCTGTTCGGG CTATCTTGCT GGCTGTCCAG CGCGGCGGAT ACCGACACCC CCTTCTGGAC CATGGCCTGG TGGATAGTCA TCGGCCGCGT TGGGCTTGGG GTGATGTTGC CCGCCATGAA TGCCGGCGCG CTACGGGCGT TGCCGCCGGC ACAATTGGCG CAAGGCGCAG GGAGCCTGAA TTTTATTCGT CAGTTGGGCG GCGCCATGGG CGTCAACCTG CTGTCGGTTT TTATTGAACG ACGCGCGACG TTTCACGGCC AAATGCTGGC ACAATCGCTG ACGCTGGACA ATATTCGCAG CACCGACGCC ATCCGCCAGC TTGGCCTGCT GTTTAGCCAC GGCGGCAATC CGCTCGGCGA GCCGCTGAGC ACCCGCATCA ACCCCGGCAT CATGACCTAT CTGGAATCGG TGTTAACCCC CAAAGCACAG ATGTTTGCCT ATCTGGATGG CTTTTTTATG GTGGCGATGT TCTTTTTTCT GGCGATCTTA CCCGCCTGGT TTATCCGGCC GCGCCCGGTG CTGAACCCTA CGCCGTCATC GGCAGCCATC GCCGTGGATA ACGCCAAAGC CCCAACATGA
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Protein sequence | MSPIEAQAAR FGYRYRWLAT VTIMLGTIAT TATATIVNVA MRDIMGAFGM GQDQAQWLST AFLASMTATM LITAWTLERF GYRATYVGSL AVFIAGSLLG TFSQNSTEVI IARILQGGAS GVIQPLAMII ISQVFPVSER GKAMGIYGVG VVLAPALGPA AGGLMVDQLD WRAVFMVVVP FCLAGIAAAW VILPGKSAQT GGSPRRFDTI GFILLVTALT SLLAGLSNGQ REGWGSFFIL CLLTTAVIST LAFIIREFTT PYPLLSLRVF ANPAFTSGCI VAFALGAGIY GSTYIIPLFV QSIQGYTPTR SGLLLMPAGL ALGMVFPLAG ALSDKLKPHL LVIAGLLLFG LSCWLSSAAD TDTPFWTMAW WIVIGRVGLG VMLPAMNAGA LRALPPAQLA QGAGSLNFIR QLGGAMGVNL LSVFIERRAT FHGQMLAQSL TLDNIRSTDA IRQLGLLFSH GGNPLGEPLS TRINPGIMTY LESVLTPKAQ MFAYLDGFFM VAMFFFLAIL PAWFIRPRPV LNPTPSSAAI AVDNAKAPT
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