Gene Dd1591_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3338 
Symbol 
ID8119074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3797902 
End bp3798840 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID644853714 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003005635 
Protein GI251790914 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TAACCATCCT GGCCGCCGCG ATGGCCTTCA CGATGTCGTC CGGTCTGGCG 
CAGGCCCAGA ACGAACAGAT TGTATTCAGT ACTCCCAACC TGGCGATGCC ATTTGAAGTC
CACATGCAGC GTACTGCGGT CAAGGCCGCC AAAGAACTGG GCGTTAACCT GCAGGTGCTG
GACAGCCAGG GCAGCTCCCC GAAACAGGTG GCGGATCTGG AAAACGCCAT CACCCGCGGC
GCGCAGGGAT TTGTGGTATC GCCGAACGAT GTCAACGCGG TATCCGGTGC GGTCACGGAA
ATTCAGGACG CCAAACTGCC GGTAGTCACG CTGGACCGCT CGGTGAAAAC CGACAAGAAA
GTGCCGCACT TCGGTGCGAA TAACTACAAA GGCGGCCAGG CAATCGGCGA TTTCGTTAAA
GCGCGCTTTC CGAACGGCGC CGACATCGTG CTGCTGACGG GGCAACCGGG GTCGTCGTCC
AACATCGAAC GTACGCAGGG CATCCGCGAC AGCCTGAAAG CCGGCGGCAG CAAGTACCGT
CTGGTGGCGG ATCAGACCGG CAACTGGATG CGTTCCGAAG GGATGCGCAT TGTGGAAAGC
GTGCTGCCGT CGCTGCCCAA GCGCCCGCAG GTGATTTTGT CGGCCAACGA CGATATGGCG
TTGGGGGCGA TTGAAGCGCT GCAAAGCCAG GGGTTGAAGC CGGGCGAGGT AATGGTCACC
GGTTTTGACG CCGTACCGGA AGCGCTGGCG CGGGTACGCG ACGGCTGGCT GGCGGCCACC
GCCGATCAAC GCCCCGGCTA CGCGGTAACA CAGGCGATGA CCCAACTGAC CAACAATATT
CGCACCAAGT CGGCGATCAC CGGAGCGGAC TATCCGCCGA CCATGATCAC CAAAGACAAC
CTGAACGATG CTGAACGTAT CGGCGAAGCG GGCAAATAA
 
Protein sequence
MKKITILAAA MAFTMSSGLA QAQNEQIVFS TPNLAMPFEV HMQRTAVKAA KELGVNLQVL 
DSQGSSPKQV ADLENAITRG AQGFVVSPND VNAVSGAVTE IQDAKLPVVT LDRSVKTDKK
VPHFGANNYK GGQAIGDFVK ARFPNGADIV LLTGQPGSSS NIERTQGIRD SLKAGGSKYR
LVADQTGNWM RSEGMRIVES VLPSLPKRPQ VILSANDDMA LGAIEALQSQ GLKPGEVMVT
GFDAVPEALA RVRDGWLAAT ADQRPGYAVT QAMTQLTNNI RTKSAITGAD YPPTMITKDN
LNDAERIGEA GK