Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3338 |
Symbol | |
ID | 8119074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3797902 |
End bp | 3798840 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644853714 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_003005635 |
Protein GI | 251790914 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAACCATCCT GGCCGCCGCG ATGGCCTTCA CGATGTCGTC CGGTCTGGCG CAGGCCCAGA ACGAACAGAT TGTATTCAGT ACTCCCAACC TGGCGATGCC ATTTGAAGTC CACATGCAGC GTACTGCGGT CAAGGCCGCC AAAGAACTGG GCGTTAACCT GCAGGTGCTG GACAGCCAGG GCAGCTCCCC GAAACAGGTG GCGGATCTGG AAAACGCCAT CACCCGCGGC GCGCAGGGAT TTGTGGTATC GCCGAACGAT GTCAACGCGG TATCCGGTGC GGTCACGGAA ATTCAGGACG CCAAACTGCC GGTAGTCACG CTGGACCGCT CGGTGAAAAC CGACAAGAAA GTGCCGCACT TCGGTGCGAA TAACTACAAA GGCGGCCAGG CAATCGGCGA TTTCGTTAAA GCGCGCTTTC CGAACGGCGC CGACATCGTG CTGCTGACGG GGCAACCGGG GTCGTCGTCC AACATCGAAC GTACGCAGGG CATCCGCGAC AGCCTGAAAG CCGGCGGCAG CAAGTACCGT CTGGTGGCGG ATCAGACCGG CAACTGGATG CGTTCCGAAG GGATGCGCAT TGTGGAAAGC GTGCTGCCGT CGCTGCCCAA GCGCCCGCAG GTGATTTTGT CGGCCAACGA CGATATGGCG TTGGGGGCGA TTGAAGCGCT GCAAAGCCAG GGGTTGAAGC CGGGCGAGGT AATGGTCACC GGTTTTGACG CCGTACCGGA AGCGCTGGCG CGGGTACGCG ACGGCTGGCT GGCGGCCACC GCCGATCAAC GCCCCGGCTA CGCGGTAACA CAGGCGATGA CCCAACTGAC CAACAATATT CGCACCAAGT CGGCGATCAC CGGAGCGGAC TATCCGCCGA CCATGATCAC CAAAGACAAC CTGAACGATG CTGAACGTAT CGGCGAAGCG GGCAAATAA
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Protein sequence | MKKITILAAA MAFTMSSGLA QAQNEQIVFS TPNLAMPFEV HMQRTAVKAA KELGVNLQVL DSQGSSPKQV ADLENAITRG AQGFVVSPND VNAVSGAVTE IQDAKLPVVT LDRSVKTDKK VPHFGANNYK GGQAIGDFVK ARFPNGADIV LLTGQPGSSS NIERTQGIRD SLKAGGSKYR LVADQTGNWM RSEGMRIVES VLPSLPKRPQ VILSANDDMA LGAIEALQSQ GLKPGEVMVT GFDAVPEALA RVRDGWLAAT ADQRPGYAVT QAMTQLTNNI RTKSAITGAD YPPTMITKDN LNDAERIGEA GK
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