| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3322 |
|---|
| Symbol | |
|---|
| ID | 8119058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3779578 |
|---|
| End bp | 3780384 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644853698 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_003005619 |
|---|
| Protein GI | 251790898 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0896668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC AAAAGGTTGT GGTGGTTACC GGCGTATCGT CAGGCATAGG ACGAGCCGTC
GCACAGAAAT TTGCCAGCCA GGGCTGTATG GTCTTCGGCA CCGTGCGCAA CATCAATACC
GCGAACGCAT TGCCCGGTGT GGCACTGATC GAAATGGATG TGCGTGATGA CGACGCCGTA
CAGCGCGGCA TTCAGTCTAT CGTTGAGCGG GCTCAACGTA TTGATGTGCT TATCAATAAC
GCGGGCACGA GCTTAGTCGG CGCGGTGGAA GAGACGTCGA CGGCGGAAGC GGCCGCCCTG
TTCGATACCA ACGTGTTCAG TATTTTGCGC ACGGTACAGG CGGTGCTGCC GCTCATGCGA
GCACAGGGTA GCGGGCGGAT CGTCAATGTC AGTTCGGTGC TCGGTTTCCT CCCGGCGCCT
TACATGGGGC TGTACTCCGC GTCCAAACAT GCGGTGGAAG GACTCACGGA AAGTCTGGAT
CACGAAGTAC GCCAGTTTGG TATCCGCGTC ACGCTGGTGG AGCCGTCTTT CACCCGCACC
AATCTGGATA TCAATGCGCC GCAGACCCGC GCCAAACTCG ACAGCTACGA TCGCGAGCGG
GGACAGGCAT CACACGCCAT CATCAACAGC GTCAAAAACG CTCCCGACCC TGAAGGGGTG
GCCGCCACGA TTGTCGATGC CGCGCTGGGG CCGTGGCAGA TGCGCCGCAC ACCGTCAGGG
CAAGCCTCTC TGTTACGTAA ACTGCGCCGC TTTATGCCTG CCGGACCGGT CGATGCCAGT
TTACGTAAAA CCTTCGGGCT CAATTGA
|
|---|
| Protein sequence | MSKQKVVVVT GVSSGIGRAV AQKFASQGCM VFGTVRNINT ANALPGVALI EMDVRDDDAV
QRGIQSIVER AQRIDVLINN AGTSLVGAVE ETSTAEAAAL FDTNVFSILR TVQAVLPLMR
AQGSGRIVNV SSVLGFLPAP YMGLYSASKH AVEGLTESLD HEVRQFGIRV TLVEPSFTRT
NLDINAPQTR AKLDSYDRER GQASHAIINS VKNAPDPEGV AATIVDAALG PWQMRRTPSG
QASLLRKLRR FMPAGPVDAS LRKTFGLN
|
|---|
| |