| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3315 |
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| Symbol | |
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| ID | 8119051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3768180 |
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| End bp | 3770270 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644853691 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_003005612 |
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| Protein GI | 251790891 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA TTTTTAGGGC AAACGTACTG TTTTTAATTT TTATGATATC GCAACGTGTT
TATGCTGAAA AGGCGATGAC GACTGATGAT GTTCATTCTT TAGCTGCCAC AACGGCTGCG
AACACATCAA ATAAATACTC CGCCTCATTT CGTGAAGTGG AAATAAAGGA GTTTGTTGCG
ACTGCGGCGC AAGTTTTAAA GAAAAATATT ATTATTGATC CGTCAGTGAC CGGGCAGATT
TCTGTACGTA GTTATGATGA TTTGGATGAA ACTCAATATT TTGTTTTCTT CCTTAACGTA
ATGGAAACCT ATGGCTACAG CGTGGTTCAA ATTGATAACC ACACTCTGAA TATTGTCCCT
TTGGCGCAAT CCTTACGGGC AGCCTGGACT GAAGGCAACA CCGGGCGAGA AAAAAATATT
GTGGTGCGTT TGGCAAAAAT GGATGCGTTG CCTGGCTCGG AACTGGAGCC TATTTTAAGT
CGCATATCGG AAGACGTTGC GGTGAAACTG AAATATTACT CACCAGGGAA CTTGTTTATC
TTCACCGGGC GCGAGGATGT AGTTAAACGA CTGGTGGACA TTGTGAATCA GGTTGACAAT
GCCAGAAAAG ATAACAGTCC GGCGGTATTT AACGTGAGCC GGGCAAAAGC GTCGGATATT
GCTAAATCTT TGCAGAGTGC CTTCAAAAAC CTCAGCCCGG AAGATAAAGA TGCGCCGTTA
ATTTACGGCA ACGACGCGAC CAGGACCATT GTGGTCAAAG GCAGCGCGCA CGTGAAGACG
GAGATCAGAC GGTTAATTTC AACTATGGAC GTGCCCGATC AGCAATCCCG AGTGTTTTTT
TTAAAGTATG CCGATGCGGC GCAGATGGCG AAACTGTTCA CCAATAACCA GTCAGGAAGT
TCTGAGCCGG GCTTGTTGCC GATGGCGGGC GATAGCGGCA TGTCGATGGA CGCGCAACTG
GCGCAGCAGC AGCCAGGCGG CATGAGCTCT GGGCAGCCCG TCAACCCGGA CGGTCAGGCA
GCCGGCAACG GCACCGCACC TGTATCCGGC GCCGGTTTTT CGAACGACCT CGGCAGCCTG
TTCGGCGGTG GTGATGCGCT GGTGAGGCAA ATTCGCGTCC ATGCCGATCG CGATAACAAT
GCACTGATCG TCAGCGCGCC GCCCGACGCC ATGCGTCAGG CGGCGTCAAT TATACGGCAG
CTTGACGTTC GGCATGAGCA GGTGCTGGTT GAAGCGATTG TGGTGGAAGT ACAGCAAGCC
GAAGGCTTGA ATCTCGGTAT CGCCTGGGGA AATAGAAATT ATGGCGGCAG CAACTTCAAT
AGCGTTAACG TCGGGAATGG GTTCAATCAG CCCAATCCGT TAGTCAATGC GTTAAAAGGG
ACAGAAGGGC TGGTTGCCGG TTTTTATCAT GGCAACTGGG GAACATTGTT TAACGCGCTC
GAAAGTAATA AGCGTAATAA TATTCTCGCA ACGCCCAGCG TCGTTACCCT CGACAATCAC
CGCGCAGAAT TTAACGTCGG CCAGGACGTA CCTATTTTAA CCGGCTCGCA AACCACCAAT
AACGATAATA TTTTTAATAC GGTCCAGCGG CGCACAATTG GCATTAAGTT CAGTATCCTG
CCCCGCATCA ATCAGAGTGG AACCATCCTC TTAAATATTT CGCAGGAAAT TTCCAGCTTG
TCCGACACCG CGCAGGTAAA TAGTAATCTT GGCTCGGTGT TTAATATTCG TACGGTAAAT
AACGTAGTAC AGGTTCAGGA TGACGAAACC GTCGTGATTG GCGGGTTATT GGATGACGAA
AAAAAAGAGA CCACTAACAA GGTTCCTCTG CTGGGTGATA TTCCCTGGCT GGGCAACTTA
TTCAGGTATA CCTCGCAGAA TAATGACAAA CGTAATCTGA TGCTGTTTAT CCGCCCGCGA
ATTATTCGTG GCAACGGGGT TGAGGCCGCG CAGGCAAGGC GAGGCGCGTC TTCCTCTGTG
GCTGATGAGG CGGTGCGGAA TTTCTCCGAG TCGCAGGCGA CCGAGGGCCC GAATGCCGGA
GTGAACGCTA TTCTGAACGG CATTCAGAAA TTCACGGCGA GTTTGCGCTG A
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| Protein sequence | MNNIFRANVL FLIFMISQRV YAEKAMTTDD VHSLAATTAA NTSNKYSASF REVEIKEFVA
TAAQVLKKNI IIDPSVTGQI SVRSYDDLDE TQYFVFFLNV METYGYSVVQ IDNHTLNIVP
LAQSLRAAWT EGNTGREKNI VVRLAKMDAL PGSELEPILS RISEDVAVKL KYYSPGNLFI
FTGREDVVKR LVDIVNQVDN ARKDNSPAVF NVSRAKASDI AKSLQSAFKN LSPEDKDAPL
IYGNDATRTI VVKGSAHVKT EIRRLISTMD VPDQQSRVFF LKYADAAQMA KLFTNNQSGS
SEPGLLPMAG DSGMSMDAQL AQQQPGGMSS GQPVNPDGQA AGNGTAPVSG AGFSNDLGSL
FGGGDALVRQ IRVHADRDNN ALIVSAPPDA MRQAASIIRQ LDVRHEQVLV EAIVVEVQQA
EGLNLGIAWG NRNYGGSNFN SVNVGNGFNQ PNPLVNALKG TEGLVAGFYH GNWGTLFNAL
ESNKRNNILA TPSVVTLDNH RAEFNVGQDV PILTGSQTTN NDNIFNTVQR RTIGIKFSIL
PRINQSGTIL LNISQEISSL SDTAQVNSNL GSVFNIRTVN NVVQVQDDET VVIGGLLDDE
KKETTNKVPL LGDIPWLGNL FRYTSQNNDK RNLMLFIRPR IIRGNGVEAA QARRGASSSV
ADEAVRNFSE SQATEGPNAG VNAILNGIQK FTASLR
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