Gene Dd1591_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3285 
Symbol 
ID8120913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3734870 
End bp3736531 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content57% 
IMG OID644853662 
ProductABC transporter domain protein 
Protein accessionYP_003005583 
Protein GI251790862 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAACGT TCCTGCAGGC GTTTGCCCTG TTATGCCGTC CATTCTGGCT TGACCGGCGT 
TACTGGCAAT GCTGGTTGTT GCTGGCGGCA ATCGTGGCGA TGGGCGGCGG CATTGTGTAC
CTCAACGTCC GCATCAATGA CTGGAGCAAA ACCTTTTATG ATGCGCTGGG AGCATTCGAT
AGCAGCTTGC TTTACCGCCT GATCAAAGAG TATTGCCTCT ATATTCTGAT TTATATCGGC
ATCTTTGTGT ATCAGGAGTG GCTGACCAAA TTGTTGATTA TTCGCTGGCG TGAGCAGATG
ACGGCGGCGT TTATCGACAG TTGGCTGGCG AAACGCGCCT TTTATCGCCT GTCGTTAAGC
GGGCGGGTGG ATAACCCGGA TCAGCGTATC ACGCAGGATG TCGACCTGTT CGTCACCCAA
ACGGTGCGGT TGTCGGTGTC GTTTATCATC ACCTTCGCCC AGTTGTGCTC GTTCCTGTTA
ATCCTGTGGG ATTTGTCCGG TGTGCAGCAG TTTACGCTGT GGGGGCACAG CATTACCGTC
AGCGGCTATC TGGTATGGGT CGCCGTGCTC TACACCCTGC TGGGAAGTCT GATTACCCAG
TGGATCGGCA AACGGTTACA CGGCATCAAT TACCATAAAC AGCAGGCGGA AGCGGATTTC
CGCGCCTCGC TGCTGCGTAA GCACGATAGT GCGGAGCAGA TTGCACTGTA CGGCGGCGAG
CGGCAGGAGA AACGCCAGCT CGGCAGTTAT TTCTCTTCGA TTGTCAGCAA CTGGCGTTCA
TTGATGAACG CCGAGCGAAA TCTGGGTCTG TTCACCGTCG GTTATACCCG CGTCAGCCTG
ATTGTGCCGG TGTTTGCCGC GTTGCCGGCG TTTCTCAGCA AGACGGTCAC GCTGGGCGGA
TTAATGCAGA TTCGCAGCGC GTTCGGCCAG GTACATAGCG CATTGAGCTG GTTTATTCGG
GTGTACTACT CGTTGGTGGA GCTGTCTGCC AGTATGACGC GTTTGGATCA GTTCCGGCGG
GAAATCGAGG CGCATCAGGA TACGGCGATG CCGCAGGTGA GAGGAGAACG GCTACATGTC
GAGCGGCTCA GTTTCTCCAC GCCGCAGGGG CAGCCGCTGT TGCGTAACGT CACGTTCCAG
TGCGATCCCG GCAGTTGGAA CCGCCTTTCC GGTCACAGCG GGCTGGGAAA ATCGACCCTG
TTGCGTACGC TGGCCGGGTT GTGGCCCTAT TACGAAGGCG GCTGGCAGGT TGGACGCGGT
ACGCCGCTGT TGTTGCCGCA GCAGAGCTAT CTGGGACAGG GGACGCTGGC GGAGGTAATT
TGTTATCCGT GCGCGCCGCT GGATGATGAA GCGGCGTTGC GTCAGGTTTT GGATCAGGTT
GGGTTAAGCG ACTGGGGCGA CCGGTTGCAG CAGCAGATGA ACTGGGATCG GGTATTTTCC
GGCGGCGAGC GTCAACGGCT GGCGCTGGCG CGGGCGCTGA TTAATCGCCC GGACCATCTG
TATCTGGATG AAGCCACCAG TCATCTTGAT CAGTATGCCG CCCGACACTT GCTGGGCGTT
ATCCGTCAGG CATTGCCGGA TTGCACCGTC ATTGCGGTCA CTCACCAACA GGAACTGGCC
GATTTGTTCC ACTATCACAT CGATCTGGCG GCGTTTCGCT GA
 
Protein sequence
MRTFLQAFAL LCRPFWLDRR YWQCWLLLAA IVAMGGGIVY LNVRINDWSK TFYDALGAFD 
SSLLYRLIKE YCLYILIYIG IFVYQEWLTK LLIIRWREQM TAAFIDSWLA KRAFYRLSLS
GRVDNPDQRI TQDVDLFVTQ TVRLSVSFII TFAQLCSFLL ILWDLSGVQQ FTLWGHSITV
SGYLVWVAVL YTLLGSLITQ WIGKRLHGIN YHKQQAEADF RASLLRKHDS AEQIALYGGE
RQEKRQLGSY FSSIVSNWRS LMNAERNLGL FTVGYTRVSL IVPVFAALPA FLSKTVTLGG
LMQIRSAFGQ VHSALSWFIR VYYSLVELSA SMTRLDQFRR EIEAHQDTAM PQVRGERLHV
ERLSFSTPQG QPLLRNVTFQ CDPGSWNRLS GHSGLGKSTL LRTLAGLWPY YEGGWQVGRG
TPLLLPQQSY LGQGTLAEVI CYPCAPLDDE AALRQVLDQV GLSDWGDRLQ QQMNWDRVFS
GGERQRLALA RALINRPDHL YLDEATSHLD QYAARHLLGV IRQALPDCTV IAVTHQQELA
DLFHYHIDLA AFR