Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3253 |
Symbol | |
ID | 8120881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3700794 |
End bp | 3701447 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644853631 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_003005552 |
Protein GI | 251790831 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3145] Alkylated DNA repair protein |
TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.280139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTCG AACTGTTTGC CGATGAGCCG CCGGAACGCC GCAATGAAAC GCTGGCGCCC GGCGCGATGT GGTTGCGCGG CTTTGCCTGG CCACAGGCCG GTGAGTTGCT GGCCGTGCTG GAAACGGTGA CGCAACAAGC GCCTTTCCGC CACATGGTGA CGCCGGGCGG GCATACCATG TCGGTGGCGA TGAGCAACTG CGGGCCGCTG GGCTGGGTGA GCGACGAGCA CGGCTATCGC TACAGCGCGC AGGACCCGCT GACCGGCGAA CCGTGGCCTG CCATGCCGAC GTGCTTTTTG CGCTTGTCGC AGGCGGCGGC GCGCGAGGCC GGGTATGACG GTTTTTCACC GGACGCCTGC CTGATTAACC GTTACGCCGT TGGTGCGAAA CTGTCGTTGC ATCAGGACCG GGATGAGCAG GATTTGCGCC AGCCGATCGT CTCTGTTTCG CTGGGGTTAG GTGCGGTGTT TCTATTCGGT GGGAGGAAAC GCAGCGACCC GTGCCGGCGG TTGGCGCTGA TGCACGGCGA TGTGGTGGTG TGGGGCGGTG CGTCCCGGCT GAATTATCAC GCGATTTTGC CGCTAAAACG CGGGCCGTTG CCGGCGGGGC TTTCGGAGGC GGTTCGCCTC AATCTGACGT TTCGTAAAGT GTGA
|
Protein sequence | MNFELFADEP PERRNETLAP GAMWLRGFAW PQAGELLAVL ETVTQQAPFR HMVTPGGHTM SVAMSNCGPL GWVSDEHGYR YSAQDPLTGE PWPAMPTCFL RLSQAAAREA GYDGFSPDAC LINRYAVGAK LSLHQDRDEQ DLRQPIVSVS LGLGAVFLFG GRKRSDPCRR LALMHGDVVV WGGASRLNYH AILPLKRGPL PAGLSEAVRL NLTFRKV
|
| |