Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3239 |
Symbol | |
ID | 8120867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3685637 |
End bp | 3686830 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644853617 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003005538 |
Protein GI | 251790817 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCT GGAAACTCAA CCTCTTCGCC GCCTGGCTGG GATGCTTTTT TACCGGCATG GCCATGAGCC AGATATTGCC GTTCCTGCCG CTCTATATCG AACATCTGGG GGTCAGCGAT CATACCGCCC TCAATTTGTG GTCGGGGCTG GTGTTCAGTT CCTCGTTTTT GGTTTCCGCG ATCGTCGCGC CGTTGTGGGG CAGCCTGGCC GACCGCAAGG GGCGCAAGCT GATGTTGCTG CGCGCCGCGC TCGGCATGTC TATCGTCATG GCGCTGCAGG GCCTGGCCAC CAACGTCTGG CAACTGTTTA TTCTGCGCAC GCTGATGGGG CTCACTTCCG GCTACATTCC CAACGCCATG GCGCTGATTG CCTCGCAGGT GCCGCGCAAC CGCAGCGGTT GGGCGCTCGG CACACTTTCT ACCGGGCAAG TCGCCGGCGT GTTGATTGGC CCGCTGCTTG GCGGTTTTAT GGCCGATACC ATCGGCCTGC GCATGGTATT TTTCGTGACC TCCGCCATGC TGTTTATCTG CTTTCTGATT ACATTGTTCG CCATTCGTGA AAACGCGATT AGCGTCGGCA AAAAAGCACA GCTCAGCGGC CGGGCGGTGT TCGCCTCGCT GCCTTATCCG TTGCTGATTA TCAGTTTGTG TTTCACCACC ATGATGATTC AGATGGCGAA CGGTTCCATC AGCCCAATCC TGACGCTGTT TATCCGCGAC CTCTCGCCCA GCATTGATAA CATCGCCTTC GTCAGCGGCG TTATCGCCGC CGTGCCGGGG GTATCCGCGC TTTTATCCGC ATCGCACCTT GGCCGGCTGG GTGATCGCAT CGGCTCCCAG CGGATACTGA TCGTGGCGTT ATTCGCGTGT GCGTTGCTGT TCTTTCTGAT GTCGGCGGTA CAAAGCTCGG TCCAGCTCGG GATTTTACGC TTTGCGCTGG GGTTCGCCGA CGGTGCATTG ATGCCGGCGG TGCAGGCGCT GCTGGTGAAA TACAGTAGTC AGCAAGTCAC CGGACGCATT TTCGGTTATA ACCAATCCTG TATGTATCTG GGTAACGTGG TCGGGCCGCT GCTCGGCTCC ACCGTTTCCG CCACGCTGGG CTATCGCTGG GTATTTCTGG TGACAGCGTT GCTGGTGCTG ATTAACGGCA TCCAGTTGAT GGTGAGTTTC GCCCGTCAGC CCAAGAAAGC CTGA
|
Protein sequence | METWKLNLFA AWLGCFFTGM AMSQILPFLP LYIEHLGVSD HTALNLWSGL VFSSSFLVSA IVAPLWGSLA DRKGRKLMLL RAALGMSIVM ALQGLATNVW QLFILRTLMG LTSGYIPNAM ALIASQVPRN RSGWALGTLS TGQVAGVLIG PLLGGFMADT IGLRMVFFVT SAMLFICFLI TLFAIRENAI SVGKKAQLSG RAVFASLPYP LLIISLCFTT MMIQMANGSI SPILTLFIRD LSPSIDNIAF VSGVIAAVPG VSALLSASHL GRLGDRIGSQ RILIVALFAC ALLFFLMSAV QSSVQLGILR FALGFADGAL MPAVQALLVK YSSQQVTGRI FGYNQSCMYL GNVVGPLLGS TVSATLGYRW VFLVTALLVL INGIQLMVSF ARQPKKA
|
| |