Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3212 |
Symbol | |
ID | 8120840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3655722 |
End bp | 3656336 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644853592 |
Product | protein of unknown function DUF1440 |
Protein accession | YP_003005513 |
Protein GI | 251790792 |
COG category | [S] Function unknown |
COG ID | [COG3477] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.269877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATAT TTGAACAGAC ACCGCCAAAC CGCAGACGTT ATGGTCTTGC TGCGTTCATC GGACTGATTG CTGGTATCGT TTCAGCATTT GTTAAATGGG GGGCTGAAGT ACCGCTGCCT CCCCGCAGTC CGGTTGATAT GTTTACTTCT GCATGTGGCC CTGAGTCACT CATCCGGGCA GCAGGACAAA TCGACTGCTC CCGTAACTTC CTGAATCCTC CATATATTTT CCTTCGTGAC TGGCTCGGCC TCGCCGATCC TAATGCGGCA GTGTATACCT TTGCAGGACA TATATTTAAC TGGGTGGGTG TAACACACAT CGTCTTTTCG CTCATCTTTG CAATAGGTTA CTGTATTGTT GCTGAAGTCT TCCCTAAGAT TAAACTCTGG CAGGGCTTAC TGGCCGGTGC ATTAGCACAA CTTTTTGTTC ATATGATTTC TTTCCCTCTC ATGGGATTAA CGCCGCCATT ATTTGACCTT CCATGGTATG AGAACGTATC TGAAATCTTC GGTCATTTAA TCTGGTTTTG GTCTATTGAA ATTATTCGCA GAGATCTTCG TAACAGAATA ACTCACGAGC CAGACGCCGA AATCCCCCTA GAGTGTGTCC CGTAA
|
Protein sequence | MNIFEQTPPN RRRYGLAAFI GLIAGIVSAF VKWGAEVPLP PRSPVDMFTS ACGPESLIRA AGQIDCSRNF LNPPYIFLRD WLGLADPNAA VYTFAGHIFN WVGVTHIVFS LIFAIGYCIV AEVFPKIKLW QGLLAGALAQ LFVHMISFPL MGLTPPLFDL PWYENVSEIF GHLIWFWSIE IIRRDLRNRI THEPDAEIPL ECVP
|
| |