| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3161 |
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| Symbol | |
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| ID | 8121026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3602925 |
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| End bp | 3604118 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644853538 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003005462 |
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| Protein GI | 251790741 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.289347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC TGACAATCCT CGGTTCCACC GGTTCTATTG GCGTCAGTTC CCTGGCCGTG
GTCAGGGCCA ACCCAGACAA GTTTTCGATT ATGGCGTTGG TCGCCGGACG CAATGTTTCT
CTGATGGCGG AGCAATGCCT GGAGTTCTGC CCCGCTTATG CCTCTATGGC GGATGAGGAC
GCCGCGCGTG AACTGCGCCT CAGCTTACGG GATGCTGGCA GCAAGACGGT AGTGCTATCG
GGCGAGCAGG CTGCCTGTGA GCTGGCGGCG CTGGATGAGG TCGATCAGGT GATGGCGGCG
ATTGTCGGTG CAGCCGGACT GTTGCCGGCA TTAGCGGCGA TCCGCGCCGG CAAGCAGGTT
CTGCTGGCGA ATAAAGAATC GCTGGTGACC TGTGGTCGTC TGTTCATGGA CGAGGTAGCG
AAAAACGGGG CGCAATTGTT GCCGGTTGAT AGCGAACACA GTGCCATTTT TCAGAGTTTA
CCTGAGCCAA TCCAGCGGCA ACTGGGATAT GCTTCCCTAA CGCAATACGG GGTTGAGCGG
GTGGTGCTGA CCGGTTCGGG AGGCCCATTC CGTGAGATTC CGTTTGCCGC ATTGGAGAGC
GTCACTCCTG AGCAGGCGTG CGCCCATCCC AACTGGTCTA TGGGGCGAAA GATTTCGGTG
GATTCCGCCA CCATGATGAA TAAGGGACTG GAATATATTG AGGCGCGTTG GCTGTTTAAC
GCCTCTGAAT CACAGATGGA AGTGGTTATC CATCCCCAAT CCGTTATCCA TTCTATGGTG
CGTTATCGGG ATGGCAGTGT ATTGGCGCAG TTGGGTACGC CAGATATGCG AACCCCTATA
GCCTATGCGA TGGCTTATCC TGACCGTGTT TTTTCCGGTG CGCCTGCGCT TGATTTCTGC
CAGTTGGGGG CGTTGACCTT TTCTGCACCG GATTTCCAGC GTTACCCTTG TCTGCGTCTG
GCTATTGATG CATGTAATCA AGGGCAAGCC GCCACTACGG CGCTCAATGC GGCAAATGAA
ATTGCGGTTG CGGCATTCCT TCAATCCGGT ATTCGTTTTA CCGATATCGC CGCAGTCAAT
CAGTGCGTGA TGGAACAACT GACACTACCT GAACCGCAAA GTGTTGATGA TGTATTGTCT
ATCGATACCT GGGCAAGACA AGCCGCAGAA AATGTGTTGC GGCGTTATCA GTGA
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| Protein sequence | MKQLTILGST GSIGVSSLAV VRANPDKFSI MALVAGRNVS LMAEQCLEFC PAYASMADED
AARELRLSLR DAGSKTVVLS GEQAACELAA LDEVDQVMAA IVGAAGLLPA LAAIRAGKQV
LLANKESLVT CGRLFMDEVA KNGAQLLPVD SEHSAIFQSL PEPIQRQLGY ASLTQYGVER
VVLTGSGGPF REIPFAALES VTPEQACAHP NWSMGRKISV DSATMMNKGL EYIEARWLFN
ASESQMEVVI HPQSVIHSMV RYRDGSVLAQ LGTPDMRTPI AYAMAYPDRV FSGAPALDFC
QLGALTFSAP DFQRYPCLRL AIDACNQGQA ATTALNAANE IAVAAFLQSG IRFTDIAAVN
QCVMEQLTLP EPQSVDDVLS IDTWARQAAE NVLRRYQ
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