Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3158 |
Symbol | |
ID | 8121023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3599738 |
End bp | 3601093 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644853535 |
Product | zinc metallopeptidase RseP |
Protein accession | YP_003005459 |
Protein GI | 251790738 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00293978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAATA TTCTCTGGAG CCTGGCTGCA TTCGTCGTTG CGCTCGGTGT GTTGATCACT GTGCATGAGT TTGGGCATTT CTGGGTCGCC CGCCGTTGCG GCGTTCGTGT TGAACGGTTC TCCATCGGCT TCGGCAAGGC GTTATGGCGC CGCCGCGATC GACAGGGGAC AGAATATGTG ATCGCACTGA TTCCGCTCGG CGGTTACGTG AAAATGCTTG ACGGCCGGGT CGATGAGGTG CCTGCCGGGC TCAGGCATCA GGCATTCAAC CACAAAATGA TCTGGCAGCG AGCGGCGATT GTCAGCGCCG GGCCGATTGC CAACTTCGTA TTTGCCGTCA TGGCTTATTG GCTGGTGTTC ATCATTGGCG TTCCGGGTAT CCGCCCGGTA GTCGGCGAGG TTTTACCCGG CTCGATTGCG GCAACGGCCC AAATTTCGCC GGGAACGGAA CTAAAGTCGA TTGACGGTAT CGAAACGCCT GACTGGGATA GCGCGCGTCT GGCCTTGATT GGCAGGATTG GCGAGCCTGA CGTGGTGATT GAAACTGCGC CGTTAGGTAC CGCTAATACA GAGAGCAAAC GGCTTGAGTT GCAAGACTGG CATTTCGACC CGGAAAGGCA GGATCCGGCG GTATCGCTGG GGATTGTGCC TAAAGGGCCG CAGGTTGAAG CGGTGCTGAC ACAGGTTCAG CCTCGTTCCG CGGCTGAAAA AGCGGGTTTG CAAGTCGGGG ACAGGATCGT TAAAGTCGGT GGTCAACTGC TGGCGCGCTG GCAGCAGTTT GTCATTGTCG TGCGTGATAA CCCAGGTAAA CCGGTTGCGC TGGAGGTGGA AAGAGGCGGA AATACCCTTT CTGTTACTCT AACTCCAGAC AGTAAAACGG TGGCGAAAGG GCGTCTGGAA GGGTTCGCCG GCGTTGTGCC TAAAGTGACC CCTCTGCCTG ATGAGTATAA AACCGTGCGC CAGTATGGGC CGTTCAGCGC CATCTATGAG GCCGGGAATA AAACCTGGCT GTTGATGAAG CTGACAGTCA GTATGCTGGG TAAGTTGATT ACCGGCGACG TGAAACTGAA TAACCTGAGC GGCCCGATTT CCATCGCGCA GGGAGCAGGC ATGTCAGCAG ATTACGGATT GGTGTATTAC CTGATGTTTT TGGCGCTGAT TAGCGTCAAT CTGGGGATTA TCAATCTGTT CCCTCTGCCG GTACTGGATG GTGGTCATCT GCTCTTCCTG GCTATCGAAA AGCTGAAGGG TGGACCGGTT TCCGAGCGTG TGCAGGACGT CAGTTATCGC ATTGGCACGG TGTTGCTGGT GATGTTAATG GGTCTTGCAC TTTTCAATGA TTTCTCCCGC CTTTAG
|
Protein sequence | MLNILWSLAA FVVALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RRDRQGTEYV IALIPLGGYV KMLDGRVDEV PAGLRHQAFN HKMIWQRAAI VSAGPIANFV FAVMAYWLVF IIGVPGIRPV VGEVLPGSIA ATAQISPGTE LKSIDGIETP DWDSARLALI GRIGEPDVVI ETAPLGTANT ESKRLELQDW HFDPERQDPA VSLGIVPKGP QVEAVLTQVQ PRSAAEKAGL QVGDRIVKVG GQLLARWQQF VIVVRDNPGK PVALEVERGG NTLSVTLTPD SKTVAKGRLE GFAGVVPKVT PLPDEYKTVR QYGPFSAIYE AGNKTWLLMK LTVSMLGKLI TGDVKLNNLS GPISIAQGAG MSADYGLVYY LMFLALISVN LGIINLFPLP VLDGGHLLFL AIEKLKGGPV SERVQDVSYR IGTVLLVMLM GLALFNDFSR L
|
| |