| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3150 |
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| Symbol | dnaE |
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| ID | 8121015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3588924 |
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| End bp | 3592406 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644853527 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003005451 |
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| Protein GI | 251790730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00762737 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CACGTTTTAT TCACCTGCGT GTTCACAGTG ACTATTCCAT GATCGATGGG
CTGGCAAAAA TCGGCCCGTT GGTAAAAAAA GCCGCTGCTC TGGGGATGCC GGCACTGGCG
ATCACCGATT TTACCAACCT GTGCGGGCTG GTGAAGTTCT ATGGCGGTGC GCATAGCGCC
GGTATTAAAC CGATCATCGG CGCTGATTTT TATCTGCAAA GCGAAGAGTT AGGCGACGAA
CTGGCGCATC TCACCGTTTT GGCGATGAAT AACGAAGGTT ATCAGAACCT GACGTTGCTG
ATTTCGCGGG CTTATCAACG CGGGTATGGC GCTGACGGCC CGACTATCGA TCGGGCATGG
CTGGTGGAGC ATCAGGCTGG GTTGCTGTTG TTGTCCGGCG GGCGTCATGG TGATATCGGC
AAGTTTTTAT TGCGTGGTAA TCAGGCATTG GTGGAACAGT GCGTCGCGTT TTACCAGCAA
CATTTTCCTC AGCGGTTTTA TCTGGAGCTG ACGCGCACCG GTCGACCGGA CGAAGAAAGC
TACCTACATG CCGCAGTGAC GCTGGCTACC GCGCACGGCT TACCGGTCAT CGCCACCAAC
GAAGTCTGTT TCATCAGTCA GGATGATTTT GACGCGCATG AAATTCGCGT AGCGATTCAT
GACGGTTTTA CACTGGATGA CCCTAAACGC CCCCGTAATT ATAGTCCGCA GCAGTACATG
CGCAGCGAAG ATGAGATGTG TGAGCTGTTT GCCGACATCC CTGAAGCGCT GATTAACACG
GTAGAGATCG CCAAACGCTG TAACGTGACT ATCCGGCTCG GTGAGTATTT CCTGCCGCAA
TTTCCTACCG GCGACATGTC GACCGAGGAC TATCTGGTCA TGTGCGCTAA AAAAGGGTTG
GAAGAGCGAC TGGCGTTCTT GTTCCCGGAT GAAGACGTAC GTGCTCAGCG TCGCCCGGAA
TACGATGAAC GTCTGGATAT CGAACTCGGC GTTATCAACC AGATGGGCTT CCCCGGCTAC
TTCCTGATCG TAATGGAGTT TATCCAGTGG TCTAAAGACA ACGACGTACC GGTAGGGCCG
GGACGAGGCT CCGGCGCCGG TTCGCTGGTG GCCTACGCGC TGAAGATTAC CGATCTGGAC
CCGCTGGAAT TCGACCTGCT GTTCGAACGC TTCCTTAACC CGGAACGTGT GTCGATGCCT
GACTTTGACG TCGATTTCTG CATGGAAAAA CGTGATCTGG TGATCGAGCA TGTGGCGGAT
ATGTACGGCC GCGATGCGGT GTCGCAAATC ATCACCTTCG GTACTATGGC GGCTAAAGCG
GTTATTCGCG ACGTGGGTCG GGTGTTGGGG CATCCGTATG GTTTTGTCGA CAGGATTTCC
AAACTGGTGC CGCCCGATCC GGGCATGACG CTGGAGAAAG CCTTTGCCGC TGAGCCGCAA
CTGGGCGAAA TTTACGAAGC GGATGAAGAG GTTAAGGCGC TGATTGATAT GGCGCGCAAG
TTGGAGGGGG TAACCCGTAA CGCCGGGAAA CATGCCGGTG GGGTGGTGAT TTCACCCACT
AAAATCACCG ATTTTGCGCC GCTGTATTGC GACCCGGAAG GGCATCACCC GGTCACCCAG
TTCGACAAGA GCGACGTAGA ATACGCCGGG CTGGTGAAAT TCGACTTCCT CGGCTTACGT
ACGCTGACCA TCATTAACTG GGCGCTGGAG ATGATTAACG CCCGGCGCGA AAAACAGGGG
CTGGAACCGG TAGATATCGC CGCCATCCCG CTGGATGACA AGAACAGTTT CGGCATGCTG
CAGCGGTCGG AAACCACGGC GGTGTTCCAG CTTGAATCGC GCGGCATGAA AGACCTTATC
AAGCGCCTTA AGCCGGACTG TTTTGAAGAT ATGATCGCTC TGGTGGCCCT GTTCCGCCCG
GGGCCGCTGC AATCAGGGAT GGTGGATAAC TTTATCGACC GTAAGCACGG ACGTGAAGCG
ATTTCCTATC CGGATATCCA GTGGCAGCAT GAGACGCTCA AGCCTGTGCT GGAGCCGACC
TATGGTATTA TTCTGTATCA GGAACAGGTG ATGCAGATTG CCCAGGTACT GGCCGGGTAC
ACCCTCGGCG GTGCGGATAT GCTGCGCCGC GCGATGGGTA AGAAAAAACC TGAAGAAATG
GCCAAACAGC GCTCGGTATT CAAAGAGGGC GCGGAGAGGA TGGGGGTCGA CGGCGAGCTG
TCGATGAAAA TCTTCGACCT GGTGGAGAAA TTCGCCGGTT ATGGCTTTAA CAAGTCGCAT
TCGGCTGCTT ATGCTTTGGT GTCGTATCAG ACGTTATGGC TGAAAGCACA CTACCCGGCG
GAGTTTATGG CGGCGGTAAT GACCGCCGAT ATGGACAACA CCGACAAGAT AGTCGGGCTG
GTGGATGAAT GCTGGCGTAT GGGATTGAAG ATCCTGCCGC CGGACATCAA TAGCGGGCTC
TACCATTTCC ACGTCAACGA TGACGGCGAA ATTGTCTACG GCATCGGCGC CATCAAAGGC
GTGGGTGAAG GGCCGATTGA AGCCATTATC GAAGCACGTA ATAACGGCGG CTATTTCCGT
GATTTGTTTG ATCTGTGCGC CCGCACGGAT ATTAAGAAGC TGAACCGCCG GGTGCTGGAA
AAACTGATCA TGTCCGGTGC GTTTGACCGG CTTGGCCCGC ATCGGGCGGC GCTGATGAAT
TCGCTGGCAG ATGCCATGAA ATCAGCCGAT CAGCACGCAA AGGCGGAGGC TATCGGTCAG
GCGGATATGT TCGGCGTACT GGCGGAAACC CCCGAACAGG TAGAGCAGTC TTACAGTACG
GTGCCGCCGT GGCCTGAGCA GGTGGTGCTG GATGGTGAAA GGGAAACGCT GGGGTTATAC
CTGACCGGCC ATCCCATCAA CCAATATCTG AAGGAAATCG AACGCTACGC CGGAGGCGTG
CGGTTGAAAG ATATGCATCC CACGGAGCGG GGAAAAATGA CCACTGCCGT CGGGCTGGTG
CTGGCCGCCC GGGTGATGGT GACCAAGCGG GGCAACCGTA TTGGCGTCTG CACGCTGGAT
GATCGCTCCG GTCGTCTGGA GGTGATGTTG TTTACCGACG CGCTGGAAAA ATATCAGCAC
CTGCTGGAGC AGGATCGCAT TTTGATAGCC AGCGGACAGG TCAGCTTTGA TGACTTCAGC
GGTGGACTTA AAATGACGGT CAGAGAGTTA ATGGATATCA GTGAAGCGCG GGAAAAATAT
GCGCGTGGGC TTGCTATCTC GCTGACTGAC AGGCAAATTG ATGACCAGCT GTTAAACCGT
CTCCGTCAGT CGTTGGAACC CCATCGATCG GGGACGATTC CGGTGCATCT CTACTACCAG
CGCCAGGATG CGCGTGCCCG GCTACGTTTT GGTGCAGCAT GGCGCGTCAC GCCCACCGAT
GTGTTGCTGA ATGATTTACG TACCCTGGTT GGTAATGAAC AGGTAGAACT GGAATTTGAC
TAA
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| Protein sequence | MAEPRFIHLR VHSDYSMIDG LAKIGPLVKK AAALGMPALA ITDFTNLCGL VKFYGGAHSA
GIKPIIGADF YLQSEELGDE LAHLTVLAMN NEGYQNLTLL ISRAYQRGYG ADGPTIDRAW
LVEHQAGLLL LSGGRHGDIG KFLLRGNQAL VEQCVAFYQQ HFPQRFYLEL TRTGRPDEES
YLHAAVTLAT AHGLPVIATN EVCFISQDDF DAHEIRVAIH DGFTLDDPKR PRNYSPQQYM
RSEDEMCELF ADIPEALINT VEIAKRCNVT IRLGEYFLPQ FPTGDMSTED YLVMCAKKGL
EERLAFLFPD EDVRAQRRPE YDERLDIELG VINQMGFPGY FLIVMEFIQW SKDNDVPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDLVIEHVAD
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLVPPDPGMT LEKAFAAEPQ
LGEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVISPT KITDFAPLYC DPEGHHPVTQ
FDKSDVEYAG LVKFDFLGLR TLTIINWALE MINARREKQG LEPVDIAAIP LDDKNSFGML
QRSETTAVFQ LESRGMKDLI KRLKPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREA
ISYPDIQWQH ETLKPVLEPT YGIILYQEQV MQIAQVLAGY TLGGADMLRR AMGKKKPEEM
AKQRSVFKEG AERMGVDGEL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTDKIVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG
VGEGPIEAII EARNNGGYFR DLFDLCARTD IKKLNRRVLE KLIMSGAFDR LGPHRAALMN
SLADAMKSAD QHAKAEAIGQ ADMFGVLAET PEQVEQSYST VPPWPEQVVL DGERETLGLY
LTGHPINQYL KEIERYAGGV RLKDMHPTER GKMTTAVGLV LAARVMVTKR GNRIGVCTLD
DRSGRLEVML FTDALEKYQH LLEQDRILIA SGQVSFDDFS GGLKMTVREL MDISEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ RQDARARLRF GAAWRVTPTD
VLLNDLRTLV GNEQVELEFD
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